Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0622 ATGGATAGTAATAGTGTACTAAAGCCAACAAGTTTCTATAGTTTGGCTTTTATAGTACTTTTTCTATCAATGGAAGTTGGTATGTCCACTAGAGATCATAGGAAAAATAATTATAGGACATTGAGTTCTGATAATAATAATAGTAATGGTGATCTTGTGAGTAACTTGCCTGGCCAACCCCCTGTAGAGTTCAAGCACTATGCAGGGTATGTGATGGTCAATGAAACCTATGGAAGAGCACTCTTTTATTGGTTCTATGAGGCTATCACTAAACCTCAAGACAAACCTTTGGTGCTGTGGCTTAATGGAGGTCCTGGGTGCTCTTCTGTAGGATATGGAGCAACACAAGAAATTGGCCCATTCTTAGTGGACTCAGATGGCAAAGGCCTTAAATTTAATAACTACTCTTGGAACAAAGAAGCCAATATGCTATTCTTGGAATCTCCTGTTGGAGTTGGCTTTTCTTACTCAAATACAACTAGTGATTATGCACATCTTGGAGATGACATAACAGCTAATGATGCTTACAATTTTCTGCAAAATTGGTTCCTTAAGTTTCCATCATATAGAACAAGGACATTTTACATAGCAGGGGAAAGCTATGCAGGAAAGTATGTACCAGAGCTGGCTGAACTCATCTATGATAGGAACAAGGACCCTTCCCTCCATATTAATCTCAAGGGTATTTTGTTGGGGAATCCTGAAACATCTGATGGTGAAGATTGGTTAGGCCTAGTTGATTATGCTTGGAGCCATGCAGTGATATCTGATGAAACTTACAAAACAATAAGAAGAACCTGTGACTTTAACAGCAGTGATCCATGGAGTAACAAAGATTGCAGTGATGGAGTGGATGAATTACTTAAACAGTACAATGAAATTGATATCTACAGCCTCTACACCTCTGTCTGCTTTGCCAGTACAGCTCGGTCCAACGATCAACCGAATCAATTTGTGATGAAGCGATCATCTAAAATGTTACCAAGGATGATGGGTGGTTATGATCCATGCCTGGATGACTATGCCAGAGCATTTTACAATAGACCAGATGTTCAGAAGGCTCTCCATGCCAGTGATGGTCACAATCTCAAGAATTGGAGTATTTGCAACAATGATATATTCAATGGATGGAACTGGAACCATTCAAGGCCTTCTGTTATCCCAATATATAAGAAGCTTATTTCAGCAGGACTCAGGATTTGGGTATACAGTGGAGACACTGATGGTAGAGTGCCAGTGCTGTCAACAAGGTACAGCTTGAGTATCCTAGGTTTGCCCATCACTAAGCAGTGGAGGCCTTGGTACCATGAAAAGGAGGTAAGTGGGTGGTATCAAGAATATGAGGGGCTAACATTTGCAACATTTAGAGGAGCTGGCCATGCAGTGCCCTGTTTTAAACCAAGCAACTCGTTGGCATTCTTCTCTTCCTTTCTTGTTGGAGAATCTCCACCTTCTACAAGATGA 1464 0.4071 MDSNSVLKPTSFYSLAFIVLFLSMEVGMSTRDHRKNNYRTLSSDNNNSNGDLVSNLPGQPPVEFKHYAGYVMVNETYGRALFYWFYEAITKPQDKPLVLWLNGGPGCSSVGYGATQEIGPFLVDSDGKGLKFNNYSWNKEANMLFLESPVGVGFSYSNTTSDYAHLGDDITANDAYNFLQNWFLKFPSYRTRTFYIAGESYAGKYVPELAELIYDRNKDPSLHINLKGILLGNPETSDGEDWLGLVDYAWSHAVISDETYKTIRRTCDFNSSDPWSNKDCSDGVDELLKQYNEIDIYSLYTSVCFASTARSNDQPNQFVMKRSSKMLPRMMGGYDPCLDDYARAFYNRPDVQKALHASDGHNLKNWSICNNDIFNGWNWNHSRPSVIPIYKKLISAGLRIWVYSGDTDGRVPVLSTRYSLSILGLPITKQWRPWYHEKEVSGWYQEYEGLTFATFRGAGHAVPCFKPSNSLAFFSSFLVGESPPSTR* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0622 487 Pfam Serine carboxypeptidase 57 479 IPR001563 GO:0004185|GO:0006508
Aev04g0622 487 PRINTS Carboxypeptidase C serine protease (S10) family signature 146 156 IPR001563 GO:0004185|GO:0006508
Aev04g0622 487 PRINTS Carboxypeptidase C serine protease (S10) family signature 450 463 IPR001563 GO:0004185|GO:0006508
Aev04g0622 487 PRINTS Carboxypeptidase C serine protease (S10) family signature 133 145 IPR001563 GO:0004185|GO:0006508
Aev04g0622 487 PRINTS Carboxypeptidase C serine protease (S10) family signature 182 207 IPR001563 GO:0004185|GO:0006508
Aev04g0622 487 Gene3D - 337 373 - -
Aev04g0622 487 Gene3D - 386 480 - -
Aev04g0622 487 ProSitePatterns Serine carboxypeptidases, serine active site. 196 203 IPR018202 GO:0004185
Aev04g0622 487 Gene3D alpha/beta hydrolase 48 306 IPR029058 -
Aev04g0622 487 SUPERFAMILY alpha/beta-Hydrolases 49 481 IPR029058 -
Aev04g0622 487 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 13 484 IPR001563 GO:0004185|GO:0006508
Aev04g0622 487 PANTHER CARBOXYPEPTIDASE 13 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0622 Aev-Chr4 3861900 3865457 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0622 342 481 Calmodulin-binding Proteins AT2G22960 31.206 1.51e-14 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0622 K16297 - gmx:100805845 845.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g0622 04 3861900 3865457 Aev04g0622 04 3861900 3865457 ECH
Aev04g0622 04 3861900 3865457 Aev04g0184 04 1118569 1120545 ECH
Aev03g0055 03 655423 658593 Aev04g0622 04 3861900 3865457 PCT