Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0620 ATGTATAGCATGGATTCATGTTCAGGAGGGTCTCAGTGTCAGCAACCGCAGCTCCCACCTGGGTTTCGATTCCACCCAACAGATGAGGAATTGATCGTTCACTACCTAAAGAGAAAAGCTTCCTCTGCTCCACTCCCTGTTGCCATCATCGCAGAGGTTGATCTCTACAAGTTCGACCCATGGGAGCTCCCAAGTAAGGCAACGTTTGGGGAGCAAGAGTGGTACTTTTTCAGCCCAAGGGATAGGAAATACCCAAATGGGGCTCGGCCAAACAGGGCTGCTACTTCTGGGTATTGGAAAGCCACTGGGACTGACAAGCCCATAATTGCATCTGATGGGAGGCACAAAGTTGGAGTGAAGAAAGCACTTGTTTTCTACGGTGGTAAGCCTCCAAAAGGAGTCAAAACCAATTGGATCATGCATGAGTATAGGCTTGCTGATAATTCCTTCAGTTCCACCTCAAAGCCTCCTTCTCTAGCTGCTGATGGCACTAAGAAGAACTCCTTGAGGCTTGATGATTGGGTGTTGTGCCGAATATATAAAAAAAGCAACACCGGTGGTACCTTTCCAAGGACGCCATTGATGGAGCATGATAATAAAGAGGAGACTATGCTACCAACGATGTCAACTTTGTCAATGGCTAACAACACTTATCACAATTCCAAACCAACATCTTCAAGGAGTGCGAGTTATGGGCCATTGGGGCTCGAAAATGATGACAATTTCTTCGATGGAATCTTAGCATCTGATCATCAGGGTATGCAGAACAATGGTAATTCTAGCAACATGCCAATGAAAAGGACACTAATGCCTTCATCACAGTTCTGGAATGAAGCAGCAGGGTCTTCTCCAGGATCATCTTCTTCAAGCAAGAGGTTCCATTGTGATCTTAACAATGGAAGCACCACCGCTGAGGAAAACAACAATTCATTTGTTTCACTGCTTAGCCAGCTTCCTCATCAGTCCACCACTTTTCACCCAAATGCCATTCTTGGCCCTGTTGGTGATGGTGTTTTGAGGCAACAGTTTCAACTTCCAAACATAAATTGGAACTTGTAG 1059 0.4561 MYSMDSCSGGSQCQQPQLPPGFRFHPTDEELIVHYLKRKASSAPLPVAIIAEVDLYKFDPWELPSKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPIIASDGRHKVGVKKALVFYGGKPPKGVKTNWIMHEYRLADNSFSSTSKPPSLAADGTKKNSLRLDDWVLCRIYKKSNTGGTFPRTPLMEHDNKEETMLPTMSTLSMANNTYHNSKPTSSRSASYGPLGLENDDNFFDGILASDHQGMQNNGNSSNMPMKRTLMPSSQFWNEAAGSSPGSSSSSKRFHCDLNNGSTTAEENNNSFVSLLSQLPHQSTTFHPNAILGPVGDGVLRQQFQLPNINWNL* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0620 352 SUPERFAMILY NAC domain 13 182 IPR036093 GO:0003677|GO:0006355
Aev04g0620 352 MobiDBLite consensus disorder prediction 276 301 - -
Aev04g0620 352 Gene3D NAC domain 27 186 IPR036093 GO:0003677|GO:0006355
Aev04g0620 352 MobiDBLite consensus disorder prediction 1 21 - -
Aev04g0620 352 Pfam No apical meristem (NAM) protein 19 145 IPR003441 GO:0003677|GO:0006355
Aev04g0620 352 ProSiteProfiles NAC domain profile. 18 182 IPR003441 GO:0003677|GO:0006355
Aev04g0620 352 PANTHER NAC TRANSCRIPTION FACTOR 56 4 325 - -
Aev04g0620 352 PANTHER NAC TRANSCRIPTION FACTOR 56-LIKE 4 325 - -
Aev04g0620 352 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0620 Aev-Chr4 3853548 3854913 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0620 15 351 NAC Transcription Factor Family AT1G61110 56.395 3.14e-116 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aev04g0620 NAM 9.3e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0620 - - gmx:100792372 508.449