Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0606 ATGCAAATTGGAAGGAAATCAAAGTCATATAATAGCAGGACCATTATGAGTTGTGGCTGCTTTGGAGCCTCATCAGCTAAAAAGAAGGGAGGAGGGAGAAGAAGAAACCCTTCTCATCATGTTTCTAATGAAATCGATGGCTATCCCTTATCTAATGTTAGAGAATTCTCTGATAAAGAACTGAGATTGGCAACTGATAATTATCATTCTAGCACTAAGATTGGAAGAGGCGGTTTCGGCACTGTTTATAAGGGAACCTTGAAAGATGGAAAACAGGTAGCAGTGAAGACTCTTGCAGTAGGTTCAAGGCAAGGAGTTCATGAATTTCTGACTGAGATTAAGACTTTATCAAATGTCAAACATCCAAACCTTGTTGAATTGATTGGATTCTGCATTCAAGGACCAAACCGTACACTAGTCTATGAGTATGTTGACAATGGCAACCTTGACAGTGCAATACTTGGGAAAAGGAGTGCAAGCATCAAATTAGACTGGAGAAAAAGATCTGCAATTTGCATAGGTACTGCTAAAGGTCTTGCATTTCTTCATGAAGAACTTGTGCCACATACTGTGCACAGAGACATTAAAGCTAGTAATGTGCTACTTGACAAAGACTACAATCCAAAAATTGGTGATTTTGGATTGGCTAAACTATTTCCAGATGATATTACTCACATCAGCACAAAAATTGCTGGAACAACTGGTTACTTAGCACCAGAATATGCATTAGGTGGTCAATTAACCAAGAAGGCTGATGTATACAGTTTTGGGGTTCTTGTGCTTGAAATCATTAGTGGCAAACGCAGCTCCAAGTCAAATTGGGGAGAGTCCAACAAGTTACTCTTGGAATGGGCTTGGCAACTTCATGAAGAGGGGAAACTGATAGATCTTGTGGATCCAGAAATGAAAGAGTATCCAGAGAAAGAGGTAATAAAGTACATGAAGGTTGCATTCTTCTGCACACAGGCAGCAGCAAGCAGAAGGCCATCAATGACACAAGTGGTTGACATGCTCTCAAAGGAAATCCAGCTCAATGAGAGCCAACTCATAGCACCAGGGTTCTTCATGGATTCATCTCCAGAATCCTCACTCAAAATGTCAATCTCTGACTCTGCAATCCATCATGTTAGCTCTAAGAATTTCAGTATTACTCAGGTGATCCCCCGGTGA 1170 0.406 MQIGRKSKSYNSRTIMSCGCFGASSAKKKGGGRRRNPSHHVSNEIDGYPLSNVREFSDKELRLATDNYHSSTKIGRGGFGTVYKGTLKDGKQVAVKTLAVGSRQGVHEFLTEIKTLSNVKHPNLVELIGFCIQGPNRTLVYEYVDNGNLDSAILGKRSASIKLDWRKRSAICIGTAKGLAFLHEELVPHTVHRDIKASNVLLDKDYNPKIGDFGLAKLFPDDITHISTKIAGTTGYLAPEYALGGQLTKKADVYSFGVLVLEIISGKRSSKSNWGESNKLLLEWAWQLHEEGKLIDLVDPEMKEYPEKEVIKYMKVAFFCTQAAASRRPSMTQVVDMLSKEIQLNESQLIAPGFFMDSSPESSLKMSISDSAIHHVSSKNFSITQVIPR* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0606 389 CDD STKc_IRAK 74 340 - -
Aev04g0606 389 Gene3D Transferase(Phosphotransferase) domain 1 144 351 - -
Aev04g0606 389 PANTHER - 13 381 - -
Aev04g0606 389 Gene3D Phosphorylase Kinase; domain 1 39 143 - -
Aev04g0606 389 SUPERFAMILY Protein kinase-like (PK-like) 52 363 IPR011009 -
Aev04g0606 389 ProSiteProfiles Protein kinase domain profile. 68 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev04g0606 389 MobiDBLite consensus disorder prediction 25 46 - -
Aev04g0606 389 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 13 381 - -
Aev04g0606 389 SMART serkin_6 68 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev04g0606 389 ProSitePatterns Protein kinases ATP-binding region signature. 74 96 IPR017441 GO:0005524
Aev04g0606 389 Pfam Protein tyrosine and serine/threonine kinase 71 338 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0606 Aev-Chr4 3741892 3744185 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0606 56 388 Receptor kinase-like Gene Family AT1G56120 48.048 4.02e-107 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aev04g0606 PK_Tyr_Ser-Thr 1.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0606 - - mtr:MTR_2g013210 568.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0076 03 783829 786667 Aev04g0606 04 3741892 3744185 PCT