Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0564 ATGGAAAGTGACTGGGACCCTGAAAAAATATTTCGACTGTATGTGTATGATTATATGATCAAAAGGGGAATGCAAGATGCCGCTGAAATTTTCAAGAATGAAGGCAATGTTTCTCAGTGTCCCGTTGTGCTTGATTCTCCTGATGGATTCCTGCATGAATGGTGGTGTATTTTCTTTGAGGTTTTTAAGTCTAGGCAAGTGAATGATCAGGGGATTGCGGTTGGATCCTCAAGCAAGGAGGTCCCAAAAGTTACAGATAATGCAAGCCGTATAGCCCCCCATAGGATCCCTCTACCACCAATGTGGGAGCAGAGACCTGAACAATGTCAAGTCAACAACAGCCTTAACAAGATGATGGCACAACCAGCTACTTGTCTAAAACCATCACCCATGAATGCTAAAGAGCGTCCTGGGCATCTGATGGGAGATGTTGACCCACGTTTGCTTGAGATTTTCAAAGCGAGTAATTCGACATTCTTGGCAGGGACTAGTTCAAATTCAAATCATCTACCTCAAGGTCTAGGCAAGCAGGCCAAGAAGCAAGTCTTCAAGGACAGTGGAACTGGCATTGACACGGGGAGGGATGTACCTAGGGAGCTTCTGGAAGTAATACAAAGGACAATGCAGCCTTTGAATGAACCTCATGAAACAAGTTCGTTGCCTCCAATTTATACCAATGAAGTTCCCAATCTAGTGTCGCTTAGTGGCTTGCCAGTAAATAACCAGGCCTTAGCTTCACTTTTGCGAGCACAAAACAATCAACAGTGTCAAGTGTTGACCACACAAAATCGGGAAGACTTCCCTGCTCGAGTACTTTTACGTGCTCCTAATAGTCAGACTCTTGCAGTTCCTGGAAATTCTACCAAATGTAACAATCTTCATATGAACATTCCCCGGACTGAACCAAGCAAAACGGATAGGCAGATGGTGCACCAAATGGTTAGAGATCACCAACCTCAGATGCAGTCTCAGAATGTTGAGATGAGCAGAAAGAGAAAGGCAACCGTATTCTTGAGACCAGGAGAAAATGCCCCGGATCAGGTGGATGCAGCAGATGGAAAACCTATGGACGAAAGTGTGGAGTCTTTCCTGTCTTTTGAAAATGAAAATGCTGATCATAGAGCTGTGGCTTTCAGCAATCTCAAACGCATTTCAACTGCGCCAAGTAAAAATGAAAATAAAGGTTTTTCATTCGAAGAAGTCGGATGCCTTCATTCCAGCAAAAGCAAAGTTTTGTCCACCCATTTTTCATCAGATGGAAAGGTTTTGGCAAGTGCTGGACATGAGAAGAAGGTTTTCATTTGGAACATGGAAACTTTTGATTGTGTTACTACTGCAGAAGAACATTCACATCTCATTACAGATGTTCGGTTTAGAGCAGGTTCAACTATATTTGCGACATCTTCCTTTGACGGATCTATAAAGCTATGGGATGCAGCCAGACCCACCGAATCACTGTTCCAACTCAGAGGGCATGATGAACAAGTCATGTCACTAGACTTCCACCCAAGAAAGAACGACCTTCTTTGCTCGTGTGATAGTAGTGATGTAATTCGACTGTGGAATGTCAACCAGCGTACTTGCTTGCAGAGTTCTAAGGGTGGTACTAAACAAATCAGGTTCCAGCCTCGTATTGGGAAGTTTTTGGCTGCTGCTTCAGGAGATAACATCAAGATAGTTGATGTCCAGACTAATAAACTTCTGTACACTCTCAGGGGCCATGTTAAAGATGTTCTTTCCATTTGTTGGGACACTAGTGGGAGCTATCTTGCCTCCGTCGGCGAAGATAGTGCACGTGTCTGGTCTGTTGTTACTGATGGAAAATGCATAAGTGAATTGCAGTCCAACGGGAACAAGTTTCAGTCGTGCATATTTCATCCAGGATACCAAAACCTCTTAGCCATTGGTGGCTATCAGTCCCTTGAATTGTGGTGTCCAACAGAGAGCAGCAAGACATTGACAGTTCCTGCGCACATGGGACTAATTGCAGGACTAGCAGACTCACCCCAAGATGAACTAATTGCCTCAGCTAGCCATGATCATTGCGTGAAACTATGGAAATAA 2064 0.4399 MESDWDPEKIFRLYVYDYMIKRGMQDAAEIFKNEGNVSQCPVVLDSPDGFLHEWWCIFFEVFKSRQVNDQGIAVGSSSKEVPKVTDNASRIAPHRIPLPPMWEQRPEQCQVNNSLNKMMAQPATCLKPSPMNAKERPGHLMGDVDPRLLEIFKASNSTFLAGTSSNSNHLPQGLGKQAKKQVFKDSGTGIDTGRDVPRELLEVIQRTMQPLNEPHETSSLPPIYTNEVPNLVSLSGLPVNNQALASLLRAQNNQQCQVLTTQNREDFPARVLLRAPNSQTLAVPGNSTKCNNLHMNIPRTEPSKTDRQMVHQMVRDHQPQMQSQNVEMSRKRKATVFLRPGENAPDQVDAADGKPMDESVESFLSFENENADHRAVAFSNLKRISTAPSKNENKGFSFEEVGCLHSSKSKVLSTHFSSDGKVLASAGHEKKVFIWNMETFDCVTTAEEHSHLITDVRFRAGSTIFATSSFDGSIKLWDAARPTESLFQLRGHDEQVMSLDFHPRKNDLLCSCDSSDVIRLWNVNQRTCLQSSKGGTKQIRFQPRIGKFLAAASGDNIKIVDVQTNKLLYTLRGHVKDVLSICWDTSGSYLASVGEDSARVWSVVTDGKCISELQSNGNKFQSCIFHPGYQNLLAIGGYQSLELWCPTESSKTLTVPAHMGLIAGLADSPQDELIASASHDHCVKLWK* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0564 687 ProSiteProfiles Trp-Asp (WD) repeats profile. 489 531 IPR001680 GO:0005515
Aev04g0564 687 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 655 687 - -
Aev04g0564 687 ProSiteProfiles Trp-Asp (WD) repeats profile. 404 445 IPR001680 GO:0005515
Aev04g0564 687 SUPERFAMILY WD40 repeat-like 398 687 IPR036322 GO:0005515
Aev04g0564 687 Gene3D - 357 536 IPR015943 GO:0005515
Aev04g0564 687 ProSiteProfiles Trp-Asp (WD) repeats profile. 446 478 IPR001680 GO:0005515
Aev04g0564 687 Pfam WD domain, G-beta repeat 441 478 IPR001680 GO:0005515
Aev04g0564 687 Pfam WD domain, G-beta repeat 409 436 IPR001680 GO:0005515
Aev04g0564 687 Pfam WD domain, G-beta repeat 654 687 IPR001680 GO:0005515
Aev04g0564 687 Pfam WD domain, G-beta repeat 486 522 IPR001680 GO:0005515
Aev04g0564 687 Pfam WD domain, G-beta repeat 566 601 IPR001680 GO:0005515
Aev04g0564 687 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 404 439 - -
Aev04g0564 687 MobiDBLite consensus disorder prediction 162 195 - -
Aev04g0564 687 PANTHER TRANSCRIPTIONAL REGULATOR OF FILAMENTOUS GROWTH FLO8 5 687 IPR044716 GO:0003714
Aev04g0564 687 Gene3D - 537 687 IPR015943 GO:0005515
Aev04g0564 687 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 446 478 - -
Aev04g0564 687 ProSiteProfiles Trp-Asp (WD) repeats profile. 655 687 IPR001680 GO:0005515
Aev04g0564 687 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 489 524 - -
Aev04g0564 687 ProSiteProfiles LIS1 homology (LisH) motif profile. 7 39 IPR006594 GO:0005515
Aev04g0564 687 SMART WD40_4 397 436 IPR001680 GO:0005515
Aev04g0564 687 SMART WD40_4 525 561 IPR001680 GO:0005515
Aev04g0564 687 SMART WD40_4 606 645 IPR001680 GO:0005515
Aev04g0564 687 SMART WD40_4 439 478 IPR001680 GO:0005515
Aev04g0564 687 SMART WD40_4 564 602 IPR001680 GO:0005515
Aev04g0564 687 SMART WD40_4 646 687 IPR001680 GO:0005515
Aev04g0564 687 SMART WD40_4 482 522 IPR001680 GO:0005515
Aev04g0564 687 CDD WD40 400 687 - -
Aev04g0564 687 Pfam LisH 14 35 IPR006594 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0564 Aev-Chr4 3508469 3513633 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0564 391 686 Miscellaneous Gene Families AT5G08390 23.377 4.83e-17 83.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR LUG Aev04g0564 WD40 0.018 CL0186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0564 - - gsj:114387334 845.114