Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0554 ATGTCTCCGCCTCATTCCCCCGTCACAGATGACGAAGAGACCGATCCATCTATTGAAGCATCTGCCTCTGACGCTGATGCCAATGCCGAAGAAGAAGAAGAGGAATTTGAAGAGGTTGAAGAAGAAGTAGAAGAGGAAGTGGAGGTGGAAGAGGAGGAGGAGGAGGAGGAAGAAGAAGAAGAAGAGGTCGAAGAGGAGGAGGAAGTGGAAGAAGAGGAGGAGGAAGAAGTCGAAGAAGGAGTGGAAGAAGAGGAAGAAGAAGAAGTCCAAGAGGAGGAAGAAGAAGTGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGTTGAAGAAGAGGAAGAAGAAGTCGAAGGAGAAGAAGTAGAGGAAGAGGAGATGGAGGAGGAAGAGGATGCGGATGATGTCAAAGTGGCTGTGCCAGATTCTGCACTCGATTCCGATAAGGATCACAGAGATTCAAGCCATCAAATGGAATCTGAGGGGCAAGAAGTGAACTTGAGGTCAGTTTCTTCTGTGGCAGAAAACCATGCAGTAATGCCATCATCTAGTATCCATTCCAAGGAAGAGAATCAGGCCATGCTCAAAGCATCTGTTCCTTCATGTGAGATACTATCACTGAAAAAGGAAGAGATTCACCCAAAACACGAAATTTCTAGTCTTTCAGAATCACAAAAGAACCTGACTTCTGCCACATCTGCTGAAGATGGCAAAAGTCAAGTTTTAGATGCTGATGTTGAAAATGCAGGAACCCTTCTACAAAGTAAAACCATTGGTGGATGCAGCGAACCAAGTTGCAGCAGCAAAGGTTATTTAGGTGGTGTTAAGGATATGAATTCTGGGGCCACCAAGTCATCTAATGATACTGGAAAAGATGTGGCCACTGGCCTCCCACAGAGAGACTGCTTTGTTGACCGCGTTGATGACAGTCAGAATTCCTTGAAAGGAACTACACCATTAGATGTTGATGTTGAAAATGCTGGAACCCTTGTACAGTGTAAAACCTTTGGCGGACGCAGTGAACCAAGTTGCAATAGCAAAGATTATTTGGGTGGTGTTAAGGATATAGATTCTGGGGCCACCAAGTCATCTAGTGATACAGGAAAAAATGTGGCTACTGGCCTGCCACAGAGAGATTGCTTTGTTAACCGCACTGATGGTAGTCAGAATTCCTTGAAAGAAATCATGCCACTGGAGTTGGAGTCAAAGGATGATGTGAAACTAAAGTCATCAAGGACTAGAAGTGTATCTCCCAATGCTGAGATAAAAGAAGGACACAAACGTCAAAATATTATATGTGATTTTTTTGCTAAAGGGTGGTGCATCAGAGGTAGCTCTTGTAGCTTTCTTCATATAAAAGATTCTTCAAATAATGCTGGCCAGAAGGCTGAAGGAGAAGACTTGGTTAATGCAAAGCTGAAGAGAGAATTAAAATCGGAAGAAGGTATGAAAGACAATTTCAAGAGATCAAAGATGAATGAGCAAGAAACCCCAAGTTGGCATCCTTCTCAAGAAAAACATAACTTTCGGTCAATGGACAACTTGTTTCCAGAGAGTAGATTTGCGGTTAATGCATCAAGCAACTATTTCAGCTCAAATGTTTCTTCCTATTCAAACCGTGCAGAGGGAATGACTACCATTCGGGGCCAGCATATGTACAATGGATCCACTTTCTCTGGCTCACAGCGTGAGGATTTGCCTCTAGTTGGTTCATCAAGGGTTGCAACACACTCCAGTGGATATATATCAAAAATATGTTCATATGATTGGGAACCTTCCATACCATTTCGACCATCTTTTTTTATTACTTCTATGAATGTATCGACCCCGGGAGATTTGTATGACCCTCTCCGTGATAGCATTGAGATACCAAATATAGGAGATGGGTCTATGAAAGCTTCCCTTTTAATTCAAGGGTCATCCATCCATGCTTCGTCACAAGTGCAGAAATATGGTGATTCTGCTGCAGTTGGGAAACGCGTGTCTGATTTTAATGATGACAAGAGTTCTGTATCTTCTCATAATAGATATTATGAAAATGAGCAAAACAAAGGTTTGGTTCCCCGTGAAAAAGCTTGTCTTGCAACTGAAATGGAAATAACATCAGGAACTTGTACGAACTCTCCCAATGGTAAAATGGGCATGGGACAACATACATTTGGTGTCAAAGATATTACAAAAACAGAGAGAGAACGGACTGAGCATGATTCTAGGCATCATGGTGAAGGATCAGGGCACAAAAAGAGAGTAGACAGGGATAAGAAAATTAATGATATGGATGTTGACTTTCAGGCAGATGGTAGTGTGCAGAAAGAAACAAAAGCACTCAAAAATTTCCGTGCAGCTCTTGTTGATCTAGTGAAAGAGTTGTTAAAACCATCTTGGCATGATGGTCGTCTAAGCAAGGATGCACATATTATGATAGTTAAAAAATCAGTTGACAAGGTTCTTAGCACCTTAGAGCCTCACCAGATCCCGACTACCATAGATACTGCTAAGCAATATGTTTCTTCATGTCGAGCGAAAATTGCAAAGCTGGTCAATGGATATGTCAATAAATATGGCAAATCATGA 2568 0.4229 MSPPHSPVTDDEETDPSIEASASDADANAEEEEEEFEEVEEEVEEEVEVEEEEEEEEEEEEEVEEEEEVEEEEEEEVEEGVEEEEEEEVQEEEEEVEEEEEEEEEEEVEEEEEEVEGEEVEEEEMEEEEDADDVKVAVPDSALDSDKDHRDSSHQMESEGQEVNLRSVSSVAENHAVMPSSSIHSKEENQAMLKASVPSCEILSLKKEEIHPKHEISSLSESQKNLTSATSAEDGKSQVLDADVENAGTLLQSKTIGGCSEPSCSSKGYLGGVKDMNSGATKSSNDTGKDVATGLPQRDCFVDRVDDSQNSLKGTTPLDVDVENAGTLVQCKTFGGRSEPSCNSKDYLGGVKDIDSGATKSSSDTGKNVATGLPQRDCFVNRTDGSQNSLKEIMPLELESKDDVKLKSSRTRSVSPNAEIKEGHKRQNIICDFFAKGWCIRGSSCSFLHIKDSSNNAGQKAEGEDLVNAKLKRELKSEEGMKDNFKRSKMNEQETPSWHPSQEKHNFRSMDNLFPESRFAVNASSNYFSSNVSSYSNRAEGMTTIRGQHMYNGSTFSGSQREDLPLVGSSRVATHSSGYISKICSYDWEPSIPFRPSFFITSMNVSTPGDLYDPLRDSIEIPNIGDGSMKASLLIQGSSIHASSQVQKYGDSAAVGKRVSDFNDDKSSVSSHNRYYENEQNKGLVPREKACLATEMEITSGTCTNSPNGKMGMGQHTFGVKDITKTERERTEHDSRHHGEGSGHKKRVDRDKKINDMDVDFQADGSVQKETKALKNFRAALVDLVKELLKPSWHDGRLSKDAHIMIVKKSVDKVLSTLEPHQIPTTIDTAKQYVSSCRAKIAKLVNGYVNKYGKS* 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0554 855 MobiDBLite consensus disorder prediction 1 168 - -
Aev04g0554 855 MobiDBLite consensus disorder prediction 726 751 - -
Aev04g0554 855 Gene3D - 417 503 - -
Aev04g0554 855 ProSiteProfiles Zinc finger C3H1-type profile. 425 452 IPR000571 GO:0046872
Aev04g0554 855 Coils Coil 468 488 - -
Aev04g0554 855 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 118 855 - -
Aev04g0554 855 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 430 449 IPR000571 GO:0046872
Aev04g0554 855 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 118 855 - -
Aev04g0554 855 SUPERFAMILY CCCH zinc finger 424 449 IPR036855 GO:0046872
Aev04g0554 855 Coils Coil 22 130 - -
Aev04g0554 855 MobiDBLite consensus disorder prediction 219 235 - -
Aev04g0554 855 MobiDBLite consensus disorder prediction 212 241 - -
Aev04g0554 855 MobiDBLite consensus disorder prediction 13 134 - -
Aev04g0554 855 MobiDBLite consensus disorder prediction 135 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0554 Aev-Chr4 3444311 3449171 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Aev04g0554 zf-CCCH 8.3e-06 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0554 - - adu:107468208 799.275