Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0552 ATGGCTTCTTCTGGCTCGCGTGAGGGACACTACAGAGGAGTTCGGAAGAGGCCATGGGGACGCTACGCTGCTGAGATTCGTGATCCCTGGAAGAAGACGCGTGTCTGGTTAGGCACATTTGATACTCCTGAAGAAGCTGCCTTAGCCTACGACGGCGCCGCCAGGTCCCTCCGCGGAGCCAAGGCTAAGACCAACTTCCCTCCCGCCCCGCTTCCAGGTCTCTGCCTCGACCTCAACGCTCCTTCCTCCGATCACCACCACCGCTGGCCCTCCCTCGTCTCCTCCCGCACCGGCGCTGCCGGAGGAGGAGGCGCCGGCGGCCTTGTCCTCGGCGAGTTTCTCCATACCGGCGTTCTCAAGGATATAAACCGCATCGATCCGCCTCAGGCACCGCCGCCGCCGTCGCAGGTCGTCCACCACAGACTTGGCGAAGTGACCGTGGCGGTTGCCGGCGGAGGTGGAGTCCAGGTGGCGGAGGGCTCTTCGACGGCGTCGTTCTTAGGGCTCGTTCGGCGCGGGATTCCTATCGACTTGAACGAACCGCCGCCGTTGTGGCTATGA 561 0.6381 MASSGSREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGAKAKTNFPPAPLPGLCLDLNAPSSDHHHRWPSLVSSRTGAAGGGGAGGLVLGEFLHTGVLKDINRIDPPQAPPPPSQVVHHRLGEVTVAVAGGGGVQVAEGSSTASFLGLVRRGIPIDLNEPPPLWL* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0552 186 Pfam AP2 domain 10 59 IPR001471 GO:0003700|GO:0006355
Aev04g0552 186 Gene3D AP2/ERF domain 10 68 IPR036955 GO:0003700|GO:0006355
Aev04g0552 186 ProSiteProfiles AP2/ERF domain profile. 10 67 IPR001471 GO:0003700|GO:0006355
Aev04g0552 186 SMART rav1_2 10 73 IPR001471 GO:0003700|GO:0006355
Aev04g0552 186 CDD AP2 10 69 IPR001471 GO:0003700|GO:0006355
Aev04g0552 186 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 5 175 - -
Aev04g0552 186 PRINTS Ethylene responsive element binding protein signature 11 22 IPR001471 GO:0003700|GO:0006355
Aev04g0552 186 PRINTS Ethylene responsive element binding protein signature 33 49 IPR001471 GO:0003700|GO:0006355
Aev04g0552 186 SUPERFAMILY DNA-binding domain 10 67 IPR016177 GO:0003677
Aev04g0552 186 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 12-LIKE 5 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0552 Aev-Chr4 3434601 3435161 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0552 2 186 AP2-EREBP Transcription Factor Family AT1G28360 47.000 2.96e-44 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev04g0552 AP2 3e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0552 - - aip:107624305 256.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g0552 04 3434601 3435161 Aev04g0552 04 3434601 3435161 ECH