Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0550 ATGGCGCCGAGGGATAAGACAGGTTGCGTTAAGGGTAACGGCGGCGGGGCTGTGAAGGAGGTGCATTTTAGAGGTGTGAGGAAGAGGCCGTGGGGGAGGTATGCCGCCGAGATAAGAGATCCCGGCAAGAAGAGCCGAGTCTGGCTCGGAACTTTTGATACGGCAGAGGAGGCAGCGCGTGCATATGACGCCGCTGCGCGTGAGTTCCGTGGCCCCAAGGCCAAGACCAACTTCCCTTTCCCTTCCGACAACGACAACATCAACCTTGTCGTAAAGAACAACGATAACAACACCAACCAACATCACAGCCCAAGCCAGAGCAGCACCGTTGAGTCCTCCAGCCGCGACCGCGATCACACCGCTGCTGCCGCCGATTCATCGCCTCTCGACCTCAATTTGGCCCCTGCCGGAGCTGGTTTCTCCGCCGTAAGCGGCGGAGCTATTCGGTTCCCGTTCCAGCAGCAGTTCGCGGTCTTTCCTGGCGCGATGGCGGCGGCCAACCAGGCGATGTACTTCAACGCCGTCTTACGCGCCGGCATGGTCGATCCACGCCGGTTCGGTTTCAGTTATAACCGTCCGGTGGTGGCGGCGACGGCGGGAGCGCAAAGCGACTCGGACTCTTCATCGGTGATCGATCTGAACCACCATGAATGCGTTCTTAACGGCGGAAGGAACTTGGATCTCGACCTTAACGAACCACCTCCAGATGAGATGGCCTGA 720 0.5931 MAPRDKTGCVKGNGGGAVKEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAARAYDAAAREFRGPKAKTNFPFPSDNDNINLVVKNNDNNTNQHHSPSQSSTVESSSRDRDHTAAAADSSPLDLNLAPAGAGFSAVSGGAIRFPFQQQFAVFPGAMAAANQAMYFNAVLRAGMVDPRRFGFSYNRPVVAATAGAQSDSDSSSVIDLNHHECVLNGGRNLDLDLNEPPPDEMA* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0550 239 Gene3D AP2/ERF domain 21 80 IPR036955 GO:0003700|GO:0006355
Aev04g0550 239 ProSiteProfiles AP2/ERF domain profile. 22 79 IPR001471 GO:0003700|GO:0006355
Aev04g0550 239 SUPERFAMILY DNA-binding domain 22 80 IPR016177 GO:0003677
Aev04g0550 239 CDD AP2 22 79 IPR001471 GO:0003700|GO:0006355
Aev04g0550 239 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 4-LIKE 1 219 - -
Aev04g0550 239 Pfam AP2 domain 22 71 IPR001471 GO:0003700|GO:0006355
Aev04g0550 239 MobiDBLite consensus disorder prediction 79 111 - -
Aev04g0550 239 MobiDBLite consensus disorder prediction 72 128 - -
Aev04g0550 239 PRINTS Ethylene responsive element binding protein signature 23 34 IPR001471 GO:0003700|GO:0006355
Aev04g0550 239 PRINTS Ethylene responsive element binding protein signature 45 61 IPR001471 GO:0003700|GO:0006355
Aev04g0550 239 SMART rav1_2 22 85 IPR001471 GO:0003700|GO:0006355
Aev04g0550 239 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 1 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0550 Aev-Chr4 3417894 3418613 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0550 1 88 AP2-EREBP Transcription Factor Family AT5G44210 70.408 6.57e-41 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev04g0550 AP2 1.4e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0550 K09286 - gmx:100803173 264.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g0550 04 3417894 3418613 Aev04g0550 04 3417894 3418613 ECH
Aev10g2233 10 22555057 22555692 Aev04g0550 04 3417894 3418613 ECH