Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0541 ATGGGGGTGGACTACTATAAGACTTTGCAGGTTGACAAGAATGCCACAGATGATGATTTAAAGAAAGCATACAGAAAACTTGCCATGAAATGGCATCCTGATAAGAACCCAAACAATAAGAAAGAAGCTGAGTCCAATTTCAAACAAATATCTGAAGCCTATGAGGTTCTGAGTGATCCTCAGAAGAGAGCAATTTATGACCAGTACGGTGAAGAAGGGCTGAAAGGGCAAGTGCCAGCACCTGATGCAGCTGGTGGTGGGGCTTCATTCTTCCAAAGTGGAGATGGCTCAACAACATTCAGGTTCAATCCAAGAAATGCTGATGACATATTTTCTGAGTTCTTTGGGTTTTCAAGCCCATTTGGAGGAATGAGGGGTGGGTCAAGGCCCTTTGGTGGAGGAATCTTTGGTGATGACATGTTCAGTTCATTTGGTGGTGAAGGCAGGCCCATGAATCAGGGCCCGCGGAAGGCACCTCCAATTGAAAGATCATTGCCTTGTACCCTTGAGGATCTCTACAAGGGAACTACCAAAAAGATGAAGATCTCAAGGGAAATTGCAGATGCTAGCGGGAAAACTTTGCCGGTGGAGGAAATCTTAACCATTCAAATAAAACCGGGGTGGAAAAAAGGTACAAAAATAACCTTCCCAGAGAAAGGAAATGAGCAAGCAAATGTAATAGCTTCTGATCTAGTCTTTGTCATTGAAGAGAAAGCCCATCGTGTGTTCACAAGAGAGGGCAATGATTTGGTTGTGACACAAAAGATATCACTTGTAGAGGCTCTAACAGGGTACACTGTGCATCTTACAACATTAGATGGAAGGGCTCTTACCATTCCCATAAACAATGTGATTCATCCAACCTATGAAGAGGTTGTTCCTAGGGAAGGCATGCCAATTCCCAAAGACCCTTCAAGAAAGGGTAATCTTAGGATCAAATTCAACATTAAGTTCCCAACAAAGTTGACACCTGAGCAGAAAACCGGAATTAAGAAACTTCTGGCGCCATAG 1011 0.4342 MGVDYYKTLQVDKNATDDDLKKAYRKLAMKWHPDKNPNNKKEAESNFKQISEAYEVLSDPQKRAIYDQYGEEGLKGQVPAPDAAGGGASFFQSGDGSTTFRFNPRNADDIFSEFFGFSSPFGGMRGGSRPFGGGIFGDDMFSSFGGEGRPMNQGPRKAPPIERSLPCTLEDLYKGTTKKMKISREIADASGKTLPVEEILTIQIKPGWKKGTKITFPEKGNEQANVIASDLVFVIEEKAHRVFTREGNDLVVTQKISLVEALTGYTVHLTTLDGRALTIPINNVIHPTYEEVVPREGMPIPKDPSRKGNLRIKFNIKFPTKLTPEQKTGIKKLLAP* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0541 336 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 335 - -
Aev04g0541 336 Gene3D - 160 239 - -
Aev04g0541 336 SMART dnaj_3 3 62 IPR001623 -
Aev04g0541 336 Gene3D DnaJ domain 3 125 IPR036869 -
Aev04g0541 336 PANTHER DNAJ HOMOLOG SUBFAMILY B MEMBER 13-LIKE 1 335 - -
Aev04g0541 336 CDD DnaJ 4 59 IPR001623 -
Aev04g0541 336 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Aev04g0541 336 Pfam DnaJ domain 4 67 IPR001623 -
Aev04g0541 336 SUPERFAMILY HSP40/DnaJ peptide-binding domain 242 328 IPR008971 GO:0006457|GO:0051082
Aev04g0541 336 Pfam DnaJ C terminal domain 161 319 IPR002939 -
Aev04g0541 336 Gene3D - 240 320 - -
Aev04g0541 336 SUPERFAMILY HSP40/DnaJ peptide-binding domain 155 247 IPR008971 GO:0006457|GO:0051082
Aev04g0541 336 CDD DnaJ_C 159 322 - -
Aev04g0541 336 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Aev04g0541 336 PRINTS DnaJ domain signature 6 24 IPR001623 -
Aev04g0541 336 PRINTS DnaJ domain signature 24 39 IPR001623 -
Aev04g0541 336 PRINTS DnaJ domain signature 62 81 IPR001623 -
Aev04g0541 336 PRINTS DnaJ domain signature 42 62 IPR001623 -
Aev04g0541 336 SUPERFAMILY Chaperone J-domain 3 124 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0541 Aev-Chr4 3360644 3362055 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0541 5 69 C2H2 Transcription Factor Family AT1G74250 39.130 1.11e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0541 K09510 - qsu:112026069 539.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g0541 04 3360644 3362055 Aev04g0541 04 3360644 3362055 ECH