Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0540 ATGGGATTGGACTACTATAAGATCTTGCAGGTAGAAAGGGCTGCCTCAGATGAAGACTTGAAGAAAGCTTACAGAAAACTTGCCATGAAATGGCACCCTGATAAGAATCCAAACGATAAGAAAGAAGCTGAGACCAAATTCAAACAGATCTCTGAGGCCTATGAGGTTCTAAGTGATCCTCATAAGAGAGCAATTTGTGATCAGTATGGAGAAGAAGTACTCAAAGGGCAAGTTCCAAGACCTGATGCTGGTGGGGCTTCATTCTTCCATGGTGGTGGTGGCCCAACAATGTTTAGGTTCAATCCTAGAAATGCAGACAGCATTTTTGCTGAGGTTTTTGGCAATGCAAGCCCTTATGGAGGGATGGGATGTGGCATGGGAAGGGGCATGAGGGGTGGATCTTGGGTTTCAAGGTCCTTTGGTGGAATGTTTGGCAATGACATATTCAGTTCAGTTGGAGAAAGCAGAGCCACGAATCAAAGTCAAAGTCCGCGCAAGGCGCCTCCAATTGAAAACACACTTCCTTGCAGCCTTGAGGAACTCTACAAGGGGACAACCAAAAAGATGAAGATTTCAAGGGAAATTGTGGATGCAAGGGGGAAAGTTTTGCGAGTGGAGGAAATCTTAACCATTGAAATCAAGCCTGGATGGAAAAAGGGAACAAAAATCACTTTCCAGGAGAAAGGAAATCAGCAACCAAATGTCATTGCTGCAGATATAGTGTTTATCATTGATGAGAAACCTCACACTGTGTTTACAAGAGATGGTAATGATTTGGTTATGACAGAAAAGATATCACTTGTGGAAGCTGAAGCACCAACAGGCTACACCGTCCATCTTACAAGTCTTGATGGCAGGGATTTGACCATTGCCATAAACAATGTGATTCATCCCAACTATGAAGAGGTTGTCCCTGGAGAAGGTATGCCAATTCCAAAAGATCCTTCAAAGAGGGGTGACCTTAGGATCAAATTCAAGGTTGATGCTGGAGCAGAAAACATGAATTAA 1008 0.4345 MGLDYYKILQVERAASDEDLKKAYRKLAMKWHPDKNPNDKKEAETKFKQISEAYEVLSDPHKRAICDQYGEEVLKGQVPRPDAGGASFFHGGGGPTMFRFNPRNADSIFAEVFGNASPYGGMGCGMGRGMRGGSWVSRSFGGMFGNDIFSSVGESRATNQSQSPRKAPPIENTLPCSLEELYKGTTKKMKISREIVDARGKVLRVEEILTIEIKPGWKKGTKITFQEKGNQQPNVIAADIVFIIDEKPHTVFTRDGNDLVMTEKISLVEAEAPTGYTVHLTSLDGRDLTIAINNVIHPNYEEVVPGEGMPIPKDPSKRGDLRIKFKVDAGAENMN* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0540 335 Pfam DnaJ domain 4 67 IPR001623 -
Aev04g0540 335 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 327 - -
Aev04g0540 335 CDD DnaJ 4 59 IPR001623 -
Aev04g0540 335 Gene3D - 169 247 - -
Aev04g0540 335 Gene3D DnaJ domain 3 122 IPR036869 -
Aev04g0540 335 PRINTS DnaJ domain signature 6 24 IPR001623 -
Aev04g0540 335 PRINTS DnaJ domain signature 24 39 IPR001623 -
Aev04g0540 335 PRINTS DnaJ domain signature 42 62 IPR001623 -
Aev04g0540 335 PRINTS DnaJ domain signature 62 81 IPR001623 -
Aev04g0540 335 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Aev04g0540 335 CDD DnaJ_C 168 328 - -
Aev04g0540 335 SUPERFAMILY HSP40/DnaJ peptide-binding domain 251 327 IPR008971 GO:0006457|GO:0051082
Aev04g0540 335 Pfam DnaJ C terminal domain 170 328 IPR002939 -
Aev04g0540 335 Gene3D - 249 329 - -
Aev04g0540 335 SUPERFAMILY HSP40/DnaJ peptide-binding domain 164 259 IPR008971 GO:0006457|GO:0051082
Aev04g0540 335 SMART dnaj_3 3 62 IPR001623 -
Aev04g0540 335 SUPERFAMILY Chaperone J-domain 4 101 IPR036869 -
Aev04g0540 335 PANTHER DNAJ HOMOLOG SUBFAMILY B MEMBER 13-LIKE 1 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0540 Aev-Chr4 3358007 3359739 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0540 5 74 C2H2 Transcription Factor Family AT1G74250 35.135 1.04e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0540 K09510 - zju:107425032 490.73