Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0539 ATGGAAGGTGAAGCTGCTTCGGAGCCAGAGAACAATGTTCAGAAGGGGGAAGATGCTGGTGATGGTGATGGTGGTGGTGGTGAAAACAGTAATGAGAACATAAACAATGGAAGCAGCAGCAAAATTTTGAATTCGAGTGAGGGTCAGAGCAAGCCCAAGCGCCAGATGAAGACCCCTTTTCAGCTTGAGACGCTGGAGAAAGCCTATGCTTTGGAAACTTACCCTTCGGAGGCTATGAGGGCTGAGCTTTCAGAGAAATTGGGGTTGACGGATCGGCAGTTACAGATGTGGTTCTGCCACCGGCGGCTGAAGGACAAGAAGGAACTCCCACCAAAGAAGCCGTCCAAGAAGGTGGCACAGGTAGCTCCTGCTCCACCTGTGCCGGATTCTCCACCGGATGACCTGAGGTTGGGTCATGAGCATGTTAATGATTATGGATCCGGGTCAGGTTCGGGCTCCAGCCCGTTTACCCGTCCAGAATTGCGGAATATGGTGCCCCGGGGTTGTGTGCCGCCGCCGTTCTATGAGTCACCACAGGCTATAATGGAGATTAGAGCAATTGCTTGTGTGGAGGCACAGTTAGGGCAGCCATTGAGGGAGGATGGGCCCATTCTTGGAGTAGAGTTTGATCCATTGCCACCTGGTGCTTTCGGAGCACCCATTGGCGTTACAGAACAGCAGAAGCGACCTAGTATTGCTTATGACAGTAAAATGTATGAAAGGCATGATGTTCGAGCACATAAGGCTATGACAAGGACATTACCAGAGTATCCATTTCTTTCTAGCCAGCCTGGTATCCGGTCTGATGCATTTGGACAGTTGAACCCACCTCATTTACATGATCCAGTGGAGGGTCCTACAAGAAATCTTTTTCCTATTGGAAATGAACAAGTGCCCAAAATCCATGCTACACACAGTCATTCTGCTCGTGCTCGCATTTCATCTCAACAAGACAAGCAAGGAATTCCCTATCTATCTCCTCCTCGAGATATAGATGTTGCCCCCCAACCCCCAAGAGAATCATACACAAATGTGCCCAATGCTGGAGTAAACTCTCACTTCACTGATCAACAAATTGTTGGCCAAGAAAATCCGTATGCTTTACCTGGTGGACAAGTTGTCAATAATGATACAGTATTGCGGATGGAGAGGAAGCGGAAGAGTGATGATGCCAGAATTGCAAGGGAAGTTGAAGCGTATGAGGCAAGGATGCGGAAAGAGCTTGAAAAGCAGGAGAACCTTAGACGAAAGAACGAAGAGCGATTGAAGAAAGAAATGGAAAGACAAGATCGTGAAAGAAGGAAGGAAGAAGAGAGGTTGATGCGTGAGAGACAACGAGAAGAGGAAAGATCTAAGCGTGAACAAAGGCGGGAAATGGAGCGAAGGGAAAAGTTTTTGCTGAAAGAACATTTAAGAGCTGAGAAAAGAAGGAGAAAAGAAGAGCTTCGCAAAGAGAAAGAGGCTGAGAGAAGGAAAGCTGCCCTTGAAAAAGCAACTGCTCGTAGAATAGCTAAAGAATCTATGGAGCTTATTGAGGACGAACAGCTGGAATTGATGGAGTTGGCTGCAGCAAGCAGGGGACTCTCCTCTATTATACATCTTGATCTTGATACTTTGCAAAATCTTGACTCTTTTAGGGATTCATTGTGTGTTTTCCCACCCAAGAGTGTAAAGCTGAGAAAGCCATTTGCTATCCAACCCTGGATTAACTCAGAACAGAATGTTGGCAACCTCCTCATGGTTTGGAGATTCTTGATTACTTTTGCTGATGTTCTTGAGCTATGGCCTTTCACTCTTGATGAATTTGTTCAAGCATTTCATGATTATGATTCAAGATTGTTGGGTGAGATACATGTTGCCCTTCTTAATATCATAATAAAGGACATTGAAGATGTTGCAAGGACGCCTTCTACAGGACTAGGAATAAATCAGAATGGAGCTGCTAATCCTGGAGGTGGCCATCCAGAGATCGTAGAAGGAGCATATGCATGGGGCTTTGACATACGAAATTGGCAGAAGAACTTAAATCAACTGACATGGCCAGAGATTTTCCGACAGTTAGCATTGTCTGCAGGATTTGGACCACAGCTGAAGAAAAGAAGTATAATATGGTCATATGCAAATGATAAAGATGAGGGAAGAAGTTGTGAAGATATCATTTCTACACTTCGTAATGGTTTAGCAGCTGAAAATGCTGTGGCAAAAATGCAAGAAAAAGGCTTATTGGCACCTCGAAGATCAAGGCACAGGTTAACTCCGGGAACAGTTAAATTTGCTGCATTCCATGTTCTCTCTCTGGAGGGTAACAAGGGCTTGACAGTACTTGAGCTTGCAGAAAAAATTCAGAAATCTGGTCTTCGGGACCTGACAACCAGCAAGACACCTGAAGCATCAATTTCTGTTGCTTTGACAAGAGATGCTAAGCTTTTTGAAAGAATAGCTCCATCAACCTATCGAGTACGTGCTGCATTTAGAAAGGACCCTGCTGATGCTGAGTCCATTCTTTCAGCAGCAAGGAAGAAAATTCAAATATTTGAAAATGGGTTTCCAGCTGGTGAAGATGCTGATGATGTTGAAAGAGAAGAAGAGTCAGACAGTGATGAAGTTGATGAGGATGCTGACATTGATGATCTAGTAACTCCTTCAGGGGCAAACCTGAATTCTGAACAGTATGATAACCCAAACATTTGCGCATCAAATGGAAAAGAAAATTTGGGTAATGATGTAGAACTTATTCAAAATGAGTTTGAAGCCAGTCTGCCTCAATTTCCTGAGAATGGTTCCAAGCAAGCGGATTGTCCTGGCTCAGTTACTGAACAACCTGTTGCTTGTGAAGATTTCAATACTGGAAATATTGTTCAAGATAATATGGAGATCGATGAAAGTAAGTCTGGAGAGTCCTGGGTTCAAGGGCTTTCAGAAGGAGAATATTCCGATCTTAGTGTAGAGGAGCGTCTAAATGCTCTTGTTGCATTGGTTGGTGTGGCTAATGAAGGAAATTCAATCCGTGTTATTCTTGAGGATCGTTTGGAAGCAGCAAATGCTCTGAAGAAGCAAATGTGGGCTGAAGCACAGATAGATAAAGTTCGTCTGAAAGATGATATTATTAACAAATCAGATTTTCCATCACTTATTGGAAATAAAGTTGAAACCCATGACACATATGCTGCTGCAGAGGGCAACCAAAGCCCAATGATTGACATTAATATTGGCAATAATGAAGCATCACCCAGTACTGCTGAAAACCAGAAGGCAGCTCCTGTTGCACAGGGCTTACCTATTGAAAAGTTCTCAGTTCAAGATATGTGCACAGGCACAGGTCCAGACAACTCTCAGTTGCTGCAGCTACCTGTACAATGTTCAAAAAGGTCACGTTCACAGTTGAAATCTTATATTGCTCACATAGCAGAGGAGATGTGTGTCTACAGGTCTCTACCCCTTGGCCAAGATCGAAGACGAAATCGATATTGGCAGTTTGTTGCATCTGCCTCTAGCAACGATCCTGGTTCTGGCAGGATCTTTGTTGAATATCATGATGACAAGTGGGGGCTTATTGATTCTGTTGAGGCCTTTGACATTCTTTTGAAATCACTGGATTCGCGGGGGATCAGGGAGTCCCATTTGCGCTTAATGTTGCAAAGGATTGAGAATTCCTTTAAAGAAAATGTTCGAAGGAATACTCAAGGTGCCAAAATAGGAAGCAGAGGTGAAGTTTCCGTAAAAAGTGAAGGTAGTGAAACATTTTCTACCCTTGATCGCAATGTTGGATCTGGCAGTCCTTGCAGTACTCGTCATGGCTTGAACTCTGATACATCTGAAATCTCATCATCCTTCAATATTGAGCTTGGAAAAAGTGAGAGTGAGAAGAAAGCTGCCTTAAGAAGGTATCAAGATTTTCAAAAGTGGATGTGGAAAGAGTGCTATAATAAATCAATATTATGTGCAATGAAATATGGGACAAAGAGAAGCAAACCTCAGGTGGACATTTGTGATATCTGTCTCAACCCTTATTTTGTTGAAGACTCCCATTGCAAATCCTGCCACCAGACTTTTCCTGCAAATAATGGGTTTAGTTTTTCTAAGCATGCATTCCATTGTGGAGAAAAATTATTCAAAGATATTGGGAATTTGGAATCTTCTCTTCCCTTGCAGACAAGATTGCTTAAGGCCCTGTTGGCTTGTATTGAGGCATCTGTTCTGCCCGAAGCATTTGGAGCAATTTGGACGGATGATGTTAGAAAGCATTGGGGCAAGAAGTTGAGCCAATCATCCTCCATTGAGGAACTTTTACAGATATTGGCCCTGTTTGAGAGAGCTCTATGCCGAGATTTCTTGTCATCAAACTTCTCTACAACCGACGAACAGTTGGGATTGAGCAAGATGTCAGATGGTGCTGCACATGCTTCTACTGATCCTGAATCAGTTGCCGTACTTCCATGGGTTCCACATACCACTGCTGCTTTATCTCTCAGGCTCTTCGAGATTGATTCATCTATCAATTATGTACTGCTTGAGAAACCTGAGCCGTACAAAGAGAAAGAAGCAAGGGAATTCATAAAGCTTCCTTCAAGATATACTCCCTTCAAATCTAACAGGGAGGTTGAACCAGTAGAAGTAGTCCATGATGAATTCTTTAAAGATAAATCTGCTTCCAAGAAAATTGTACGAAGTGGCAACAAACGAGGACGGGGTTCTAATGATCAAGGACGGGTTAAAAAGCAGTCAAAAAGAATGTACAAATCCAAGCGAGACACTGGAAGGCGAAATGTTAAGTTCGTCGAGAACCTAAGTGACAAACTAAAACAGCAGGGACAAGGAACACAAGGACCAGCTGGTGGACGTGGTCGCCGAACAGTCAGGAAACGTAGAGTGGAAAAAAGAGCTGTTGAAGATTTGTTGCTAGGCCATACGGCTGCCAGTCATAGCCCCAAGATTGGTAGAGAACCATTTATGAGATTGGATGAGGAATGGGATGGTGAGAGGGCCAGCCCCATGACTCCTGTCCACATTGGGGTTGATGACAATAGCAACAGTGCTGAAGAGATGGAATCTGATGACAATGCTCAAGCAGTGGATTATGGTCAAGGGATGGAATCTGATGACAATGCTCAAGCAGTGGAATATGGTCAAGGGAACTGGGAAGTAGGTTTTAATGGTGTCCCACGCAACAGATGGAGTAGGGACTTCGTTGGAATGAGTGATGAAGATATGGATGCTTCTGAAGATGACAATGAGAATGATAATGACAATGGCATTGGCATTGAAGAGCATGAAGAGGAGTATTCAGATGCAGATGTTATGAGTGAGGGTTCAGATGGCATGGCAAATAGAGCCATAAACGAAGAAGGCTCAGACTCACCCTTATCTGAAGATTCTTCTGATTAG 5385 0.4364 MEGEAASEPENNVQKGEDAGDGDGGGGENSNENINNGSSSKILNSSEGQSKPKRQMKTPFQLETLEKAYALETYPSEAMRAELSEKLGLTDRQLQMWFCHRRLKDKKELPPKKPSKKVAQVAPAPPVPDSPPDDLRLGHEHVNDYGSGSGSGSSPFTRPELRNMVPRGCVPPPFYESPQAIMEIRAIACVEAQLGQPLREDGPILGVEFDPLPPGAFGAPIGVTEQQKRPSIAYDSKMYERHDVRAHKAMTRTLPEYPFLSSQPGIRSDAFGQLNPPHLHDPVEGPTRNLFPIGNEQVPKIHATHSHSARARISSQQDKQGIPYLSPPRDIDVAPQPPRESYTNVPNAGVNSHFTDQQIVGQENPYALPGGQVVNNDTVLRMERKRKSDDARIAREVEAYEARMRKELEKQENLRRKNEERLKKEMERQDRERRKEEERLMRERQREEERSKREQRREMERREKFLLKEHLRAEKRRRKEELRKEKEAERRKAALEKATARRIAKESMELIEDEQLELMELAAASRGLSSIIHLDLDTLQNLDSFRDSLCVFPPKSVKLRKPFAIQPWINSEQNVGNLLMVWRFLITFADVLELWPFTLDEFVQAFHDYDSRLLGEIHVALLNIIIKDIEDVARTPSTGLGINQNGAANPGGGHPEIVEGAYAWGFDIRNWQKNLNQLTWPEIFRQLALSAGFGPQLKKRSIIWSYANDKDEGRSCEDIISTLRNGLAAENAVAKMQEKGLLAPRRSRHRLTPGTVKFAAFHVLSLEGNKGLTVLELAEKIQKSGLRDLTTSKTPEASISVALTRDAKLFERIAPSTYRVRAAFRKDPADAESILSAARKKIQIFENGFPAGEDADDVEREEESDSDEVDEDADIDDLVTPSGANLNSEQYDNPNICASNGKENLGNDVELIQNEFEASLPQFPENGSKQADCPGSVTEQPVACEDFNTGNIVQDNMEIDESKSGESWVQGLSEGEYSDLSVEERLNALVALVGVANEGNSIRVILEDRLEAANALKKQMWAEAQIDKVRLKDDIINKSDFPSLIGNKVETHDTYAAAEGNQSPMIDINIGNNEASPSTAENQKAAPVAQGLPIEKFSVQDMCTGTGPDNSQLLQLPVQCSKRSRSQLKSYIAHIAEEMCVYRSLPLGQDRRRNRYWQFVASASSNDPGSGRIFVEYHDDKWGLIDSVEAFDILLKSLDSRGIRESHLRLMLQRIENSFKENVRRNTQGAKIGSRGEVSVKSEGSETFSTLDRNVGSGSPCSTRHGLNSDTSEISSSFNIELGKSESEKKAALRRYQDFQKWMWKECYNKSILCAMKYGTKRSKPQVDICDICLNPYFVEDSHCKSCHQTFPANNGFSFSKHAFHCGEKLFKDIGNLESSLPLQTRLLKALLACIEASVLPEAFGAIWTDDVRKHWGKKLSQSSSIEELLQILALFERALCRDFLSSNFSTTDEQLGLSKMSDGAAHASTDPESVAVLPWVPHTTAALSLRLFEIDSSINYVLLEKPEPYKEKEAREFIKLPSRYTPFKSNREVEPVEVVHDEFFKDKSASKKIVRSGNKRGRGSNDQGRVKKQSKRMYKSKRDTGRRNVKFVENLSDKLKQQGQGTQGPAGGRGRRTVRKRRVEKRAVEDLLLGHTAASHSPKIGREPFMRLDEEWDGERASPMTPVHIGVDDNSNSAEEMESDDNAQAVDYGQGMESDDNAQAVEYGQGNWEVGFNGVPRNRWSRDFVGMSDEDMDASEDDNENDNDNGIGIEEHEEEYSDADVMSEGSDGMANRAINEEGSDSPLSEDSSD* 1795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0539 1794 MobiDBLite consensus disorder prediction 846 876 - -
Aev04g0539 1794 ProSiteProfiles 'Homeobox' domain profile. 48 108 IPR001356 GO:0003677
Aev04g0539 1794 Pfam HB1, ASXL, restriction endonuclease HTH domain 754 822 IPR007759 GO:0006355
Aev04g0539 1794 MobiDBLite consensus disorder prediction 1735 1766 - -
Aev04g0539 1794 MobiDBLite consensus disorder prediction 105 160 - -
Aev04g0539 1794 MobiDBLite consensus disorder prediction 1713 1794 - -
Aev04g0539 1794 ProSiteProfiles DDT domain profile. 572 631 IPR018501 -
Aev04g0539 1794 MobiDBLite consensus disorder prediction 1 61 - -
Aev04g0539 1794 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1143 1215 IPR028941 -
Aev04g0539 1794 SUPERFAMILY Homeodomain-like 39 107 IPR009057 -
Aev04g0539 1794 Pfam Homeodomain 51 107 IPR001356 GO:0003677
Aev04g0539 1794 MobiDBLite consensus disorder prediction 28 57 - -
Aev04g0539 1794 SMART HOX_1 50 112 IPR001356 GO:0003677
Aev04g0539 1794 SMART testlast3 572 631 IPR018501 -
Aev04g0539 1794 MobiDBLite consensus disorder prediction 855 876 - -
Aev04g0539 1794 MobiDBLite consensus disorder prediction 308 322 - -
Aev04g0539 1794 ProSiteProfiles HARE-type HTH domain profile. 754 823 IPR007759 GO:0006355
Aev04g0539 1794 MobiDBLite consensus disorder prediction 419 459 - -
Aev04g0539 1794 MobiDBLite consensus disorder prediction 1551 1622 - -
Aev04g0539 1794 MobiDBLite consensus disorder prediction 303 351 - -
Aev04g0539 1794 Coils Coil 394 499 - -
Aev04g0539 1794 CDD homeodomain 53 108 IPR001356 GO:0003677
Aev04g0539 1794 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 22 1794 IPR044977 GO:0006357
Aev04g0539 1794 PANTHER HOMEOBOX DOMAIN PROTEIN 22 1794 - -
Aev04g0539 1794 Pfam DDT domain 574 628 IPR018501 -
Aev04g0539 1794 Gene3D - 35 109 - -
Aev04g0539 1794 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 964 1007 IPR028942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0539 Aev-Chr4 3348548 3357398 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0539 44 1695 Homeobox Transcription Factor Family AT1G28420 49.386 0.0 1306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Aev04g0539 WSD 2e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0539 - - gmx:100777465 2468.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g0539 04 3348548 3357398 Aev04g0539 04 3348548 3357398 ECH
Aev04g0539 04 3348548 3357398 Aev03g0130 03 1110458 1119267 ECH
Aev03g0130 03 1110458 1119267 Aev04g0539 04 3348548 3357398 PCT