LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev04g0521	ATGGACCAACAAAATAAACTGTTTCTTCTTCTGATGCTTCTTATCCAAGTTCTGCTTGTAGCAGCACAGACATCCAGTCAAGACTATAATGGCCTAGCAGCTTTAACAGGATTCTGGAGTAACAGACCACCAAATTGGGTTGGTACAGATCCTTGTGGCAGTGGTTGGGAAGGAATTCGTTGCACCAATTCAAGAATCACACAATTGAAACTGTTGAGCATGAATTTGGTGGGCCAGGTGTCCTCAGCAATCCAGTCATTATCTGAATTAGACACCTTGGATCTTTCTTACAACACAGGCTTGACAGGAACAATTCCACAGGAAATTGGGAATTTGAAAAAGCTAAAATCCCTGGCACTGGTTGGTTGTAACTTCTCTGGTCCCATTCCAGATTCAATAGGAGCTTTACAACAACTCACCTTTCTGGCACTGAATTCTAATCGGTTCAATGGAACTATACCGCGCTCCATTGGCAATCTGTCCAACATTGATTGGCTAGATCTCGCCGATAATCAGCTTGAAGGACCTCTTCCTGTGTCTGATAAGCAAGGACCAGGTCTTGACCTGCTCCTTAAGGCTCAACACTTTCATTTCGGTAACAACAAGCTCTCTGGTTCAATACCAGAAAAACTATTCAACTCCAATATGAATCTAAAACACTTGCTTTTAGACAGCAATCAACTGGTGGGTAGTATTCCTAGCAGCCTTGGTGAAGTGAGCACATTGGAGGTGGTGCGCATGGATAGGAATCAGCTAACCCGTGGAGTGCCTCCGATTTTCAAAAGTCTTGGAAAACTTAGTGAACTGTATTTATCCCAAAACAGCCTTAATGGTTCTCTGCCGGACCTTACTGGAATGAATAGTCTCCTCTATGTGGATATGAGCGGAAATTCATTCAGTTCTTCTGATGTTCCATCATGGGTTTCAAGTTTGCCATCCCTGACAACAGTGCAACTTAGGGATAACAAGCTGAATGGCACATTTAATCTTAGCAATGGCTACAGCACCAGTCTTCAACTCATTGATTTGCGGAATAACGAAATAATCACTTACTTGCAGCCAAAGCAAAATAGAAATCTCCAAGTGCTATTGGGTGGTAACAAAGTCTGTCTTGAAAATGGTGTTTCACAACAGAGTTACTGCCAACCTCCCCTGAGCATTCAGCCATATTCAACACCACCAAATAATTGTTCAACACAATCTTGCAGTTCCGATCAGGTTTCTAGTCCAAATTGCAAATGTGCATATCCCTATGCTGGAACACTCTTCTCAAGAGCTCTTAGTTTCTCATTCCTTAACAGTACCGAATATAAGGCTCTTGAGCAGTCTCTCTTGGATAGTTTTAGGTCCCAAAATCTTCCTGTGGATTCAGTTTCTCTGAGTAACCCCATGAGGAATTCAACTAGTGATAATTTTCAGTTGACACTGAATGTCTTCCCATCCCAAACTGATCGTTTCAATAGAACCGGAGTTTCCAGTATTGCTTTTGTGCTTAGCAATCAAATCTTCAAGCCCCCAGAATTTTTCTCCCCTTACTTCTTCAATGGTTTCAACTATGGATACTATGGAGCTGAGCCGAAAGGATCAAAGTCGTCGCATACCGGTGCTATAATTGGTGCAGTGGTTGCTGTTTTGGTGGTTGTTGTGTTAGCATTCTTTGCAGGGATATATGTCCTCCGCCGAAAGAAAAGAGCAACAGGATCTGACATGCTCAATCCATTTGCAAATTGGGAGCAAACAACGAATAGTGGCGCTGCTCCTCAGTTGAAAGGAGCAAGATGGTTTTCTTTTGAAGATCTGAAGAAATACACTAACAACTTCTCAGAAACCAACACTATAGGATCTGGGGGCTATGGAAAGGTTTACCAAGGTGTTCTTCCGGCCGGGGAAATCGTTGCCATCAAACGTGCTGCACAAGAATCTATGCAGGGTGCTCTTGAGTTTAAAACTGAGATTGAACTTCTATCAAGGGTCCACCATAAGAATCTAGTTAGTCTTGTTGGTTTCTGTTTTGAGAAGGGTGAACAAATGCTGGTGTATGAGTACATTCCAAATGGCACTATAATGGACAGCCTTTCAGGAAAATCTGGTATCTGGATGGATTGGATTCGGAGGCTGAAAGTAGCATTGGGTGCAGCTAGGGGTCTAGCCTATCTTCATGAACTTGCTAATCCACCAATCATTCACAGGGACATTAAATCAAGCAATATCCTACTTGATTCTCACCTTAATGCAAAAGTTGCTGATTTTGGTCTCTCAAAACTTCTTGTTGATAGTGAAAGGGGCCATGTCACTACTCAAGTCAAAGGAACAATGGGGTACTTGGATCCTGAGTATTACATGAGTCAGCAATTGACTGAAAAGAGTGATGTGTACAGCTTTGGAGTGGTAATGCTTGAACTAGTAACAGCAAGAAGGCCTATAGAGCAAGGAAAATATATTGTAAGAGAGGTGATGAGGGTAATGGACACATCAAAAGATTTATACAACCTTCATTCCATATTAGACCCAACCATGCTCAAAGGGACAAGCCCAAAAGGGTTAGAGAAGTTTGTGGAGCTTGCATTGAGGTGTGTCAAGGAATATGCATCTGAGAGGCCTACAATGGCAGAGGTTGTGAAAGAGATTGAGAACATAATTGAGCTTGCTGGTGTGAACCTCAATGCTGAATCAGCTTCTACAACAGAGAGTTATGATGTACCAAGAGATGGGAAGGTTCAACATCCTTATAGCAATGAAGATTTTAACTACAGTGCAATGTTTCCATCAGCAAAGCTATCTGATTCCAAAATGAGTGAAACTGACCCCAAAAACCAGTACCCTGTTCCACCTTCTTCTTCTTCTTCGTCGTCGTCATCAAATGGAAGTGGCGGTGATCATCATCATGGTTCAACCAAGTATTCAGGGCACAACCAAAAGATCCATTACAACCCACCAGATGCTGTGAATCCAGACGCTGCCACTCTGAGGGATCAATGGAAGTATGCAACCAGACAGTACAGCAAGTGGTACTCTCATGCTTGGGGCACCGCCATTCTCGCCGGCCTTGCCTTCTTTGGCCTTGGTTGGGTCATCAAAGGCGAGAATCCCTTGCTCTCTTTCCGCTCCCAAGACTCTTCTTCTTCCTCTGAATCTGATCGAGACAAGCCTCGCCCTTGA	3159	0.4311	MDQQNKLFLLLMLLIQVLLVAAQTSSQDYNGLAALTGFWSNRPPNWVGTDPCGSGWEGIRCTNSRITQLKLLSMNLVGQVSSAIQSLSELDTLDLSYNTGLTGTIPQEIGNLKKLKSLALVGCNFSGPIPDSIGALQQLTFLALNSNRFNGTIPRSIGNLSNIDWLDLADNQLEGPLPVSDKQGPGLDLLLKAQHFHFGNNKLSGSIPEKLFNSNMNLKHLLLDSNQLVGSIPSSLGEVSTLEVVRMDRNQLTRGVPPIFKSLGKLSELYLSQNSLNGSLPDLTGMNSLLYVDMSGNSFSSSDVPSWVSSLPSLTTVQLRDNKLNGTFNLSNGYSTSLQLIDLRNNEIITYLQPKQNRNLQVLLGGNKVCLENGVSQQSYCQPPLSIQPYSTPPNNCSTQSCSSDQVSSPNCKCAYPYAGTLFSRALSFSFLNSTEYKALEQSLLDSFRSQNLPVDSVSLSNPMRNSTSDNFQLTLNVFPSQTDRFNRTGVSSIAFVLSNQIFKPPEFFSPYFFNGFNYGYYGAEPKGSKSSHTGAIIGAVVAVLVVVVLAFFAGIYVLRRKKRATGSDMLNPFANWEQTTNSGAAPQLKGARWFSFEDLKKYTNNFSETNTIGSGGYGKVYQGVLPAGEIVAIKRAAQESMQGALEFKTEIELLSRVHHKNLVSLVGFCFEKGEQMLVYEYIPNGTIMDSLSGKSGIWMDWIRRLKVALGAARGLAYLHELANPPIIHRDIKSSNILLDSHLNAKVADFGLSKLLVDSERGHVTTQVKGTMGYLDPEYYMSQQLTEKSDVYSFGVVMLELVTARRPIEQGKYIVREVMRVMDTSKDLYNLHSILDPTMLKGTSPKGLEKFVELALRCVKEYASERPTMAEVVKEIENIIELAGVNLNAESASTTESYDVPRDGKVQHPYSNEDFNYSAMFPSAKLSDSKMSETDPKNQYPVPPSSSSSSSSSNGSGGDHHHGSTKYSGHNQKIHYNPPDAVNPDAATLRDQWKYATRQYSKWYSHAWGTAILAGLAFFGLGWVIKGENPLLSFRSQDSSSSSESDRDKPRP*	1053

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev04g0521	1052	Gene3D	Transferase(Phosphotransferase) domain 1	683	899	-	-
	Aev04g0521	1052	MobiDBLite	consensus disorder prediction	927	985	-	-
	Aev04g0521	1052	SMART	serkin_6	607	880	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Aev04g0521	1052	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	727	739	IPR008271	GO:0004672\|GO:0006468
	Aev04g0521	1052	SUPERFAMILY	Protein kinase-like (PK-like)	587	875	IPR011009	-
	Aev04g0521	1052	Pfam	Protein kinase domain	608	874	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Aev04g0521	1052	MobiDBLite	consensus disorder prediction	891	911	-	-
	Aev04g0521	1052	ProSitePatterns	Protein kinases ATP-binding region signature.	613	635	IPR017441	GO:0005524
	Aev04g0521	1052	Gene3D	Ribonuclease Inhibitor	183	374	IPR032675	-
	Aev04g0521	1052	PANTHER	RECEPTOR-LIKE PROTEIN 55	2	899	-	-
	Aev04g0521	1052	MobiDBLite	consensus disorder prediction	1033	1052	-	-
	Aev04g0521	1052	PANTHER	RECEPTOR-LIKE KINASE FAMILY PROTEIN, PUTATIVE-RELATED	2	899	-	-
	Aev04g0521	1052	SUPERFAMILY	L domain-like	42	364	-	-
	Aev04g0521	1052	ProSiteProfiles	Protein kinase domain profile.	607	880	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Aev04g0521	1052	Gene3D	Ribonuclease Inhibitor	29	182	IPR032675	-
	Aev04g0521	1052	MobiDBLite	consensus disorder prediction	927	961	-	-
	Aev04g0521	1052	Gene3D	Phosphorylase Kinase; domain 1	577	682	-	-
	Aev04g0521	1052	CDD	STKc_IRAK	613	879	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev04g0521	Aev-Chr4	3233871	3240326	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev04g0521	8	926	Receptor kinase-like Gene Family	AT5G49760	52.582	0.0	925

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-VIII-1	Aev04g0521		Pkinase	2e-48	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev04g0521	-		-	gmx:100786172	1350.11