Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0517 ATGAAAGAATTAGAAGCTGGTATGGTTTTGGTGTCCCAATCCCAAGCAGAGTTACCGTTCAATGAGAATGATTCACAGGACATGGTGATATACCAAGTCCTGAATGAGGCGAATGCTATAAGCAACAACACATTCATACCGCAGAGGCTTCATCAGCTTCAGCATCAGCAGCAACAGAGCCAGGAAGCAGGGGTGAACAGAGGGCATGGAATGGAGGCAACAAGGAACATAGCAAAGAAGCACTACAGGGGAGTGAGGCGTCGGCCATGGGGGAAGTATGCAGCGGAGATTCGTGACTCGGCACGACATGGAGCAAGGATATGGCTTGGAACATTCCAAACTGCTGAAGAAGCTGCTATGGCTTATGACAGAGCTGCTTTCAAGATGAGGGGTTCTAAGGCCTTGTTGAATTTTCCTGCTCAAGTTGTTGCTGCTGCTTCTGCTTCCATGCAATTATCTTCTAACAATCATCATGACTTTAATAGTACTACTAATAATCAGGATTCTGATTCGAGTGCTACTACTACTAATAACAGTTCTTGCACAAATTCTCAGTTAGAAAGCACAGTGGGAGCATCAACAGTGAAATTATCTCATCTTTCAGTTTCAATTCCACCACCATGTCGCAAAACTGGGGCCATGTTATTGTTTGGTGGTCCTAACTAA 666 0.4474 MKELEAGMVLVSQSQAELPFNENDSQDMVIYQVLNEANAISNNTFIPQRLHQLQHQQQQSQEAGVNRGHGMEATRNIAKKHYRGVRRRPWGKYAAEIRDSARHGARIWLGTFQTAEEAAMAYDRAAFKMRGSKALLNFPAQVVAAASASMQLSSNNHHDFNSTTNNQDSDSSATTTNNSSCTNSQLESTVGASTVKLSHLSVSIPPPCRKTGAMLLFGGPN* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0517 221 MobiDBLite consensus disorder prediction 155 185 - -
Aev04g0517 221 ProSiteProfiles AP2/ERF domain profile. 81 139 IPR001471 GO:0003700|GO:0006355
Aev04g0517 221 SMART rav1_2 81 145 IPR001471 GO:0003700|GO:0006355
Aev04g0517 221 CDD AP2 80 139 IPR001471 GO:0003700|GO:0006355
Aev04g0517 221 Gene3D AP2/ERF domain 80 142 IPR036955 GO:0003700|GO:0006355
Aev04g0517 221 PANTHER PATHOGENESIS-RELATED GENES TRANSCRIPTIONAL ACTIVATOR PTI5 12 156 - -
Aev04g0517 221 SUPERFAMILY DNA-binding domain 81 140 IPR016177 GO:0003677
Aev04g0517 221 PRINTS Ethylene responsive element binding protein signature 82 93 IPR001471 GO:0003700|GO:0006355
Aev04g0517 221 PRINTS Ethylene responsive element binding protein signature 105 121 IPR001471 GO:0003700|GO:0006355
Aev04g0517 221 PANTHER DNA-BINDING DOMAIN 12 156 IPR044808 GO:0003700|GO:0009873
Aev04g0517 221 Pfam AP2 domain 81 131 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0517 Aev-Chr4 3204948 3207421 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0517 12 142 AP2-EREBP Transcription Factor Family AT4G17500 47.222 1.47e-39 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Aev04g0517 AP2 5.5e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0517 K13433 - gmx:100811533 186.037
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g0517 04 3204948 3207421 Aev04g0517 04 3204948 3207421 ECH