Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0516 ATGGACAGGCATAGTAATCATCATGCAGATTCTGAAGGGATTCTTGAGAGTGTATGGGCTAAAATTATCAGCAGTGATGGCAGAAGAAGAACATTTGGTGATGTAGCAGAACCTTCTAACTCATCATGGGAAGAGCTTCCTGATCTTGATGGGAGAGATGATGGTTCTGTTGAAATTCTGCAAAGGCTTCCAAGTTTGGGGAGATGGATATCAATGGGAGCTGAATTCTGGGAACAAGCTTTGGATGGCATTATTGTACCAACAACAAATGATGCAACAAGCAACACAGAAGATCATTATTCATCTAGCAATAACAAATTGGAGATTATTGGCAGTACTAATGTCACAATATCCAATAGAAAGGTGGAGAATAATGCAAAGAGAACAGAGAAGGCAGTCATAACAAAACACTACAGGGGAGTAAGGAGAAGGCCATGGGGTAAATATGCAGCTGAGATTAGAGACTCATCAAAGAAAGGTGCTAGAGTTTGGCTTGGCACATTTGACACTGCAGAAGAAGCAGCTTTAGCATATGACAAGGCTGCTTTGAGGATTAGAGGCCCAAAAGCATACCTCAATTTCCCAATTGACACTGTCACAAAGGCTTCTTCATCAGCATTATTTGGCCACGGCTGCGCTTACTTGGGGAACAAGGAAACTTCTTGCGGTTCGCGGAAGAGAGGATCAAGGTGTGATGGGGAAGAATTTGTTGATTTGATGATGACGAATGAACAACCTGCAACAAAAAAAGTGGCAAGATTTGAAGGCATGCTAGAGAATGATGAACTAGATGTTTTTGTGTTTCAGGACCTAGGAAGCGAGTACTTGGACAATTTGTTATCATCTTTTTGA 852 0.4155 MDRHSNHHADSEGILESVWAKIISSDGRRRTFGDVAEPSNSSWEELPDLDGRDDGSVEILQRLPSLGRWISMGAEFWEQALDGIIVPTTNDATSNTEDHYSSSNNKLEIIGSTNVTISNRKVENNAKRTEKAVITKHYRGVRRRPWGKYAAEIRDSSKKGARVWLGTFDTAEEAALAYDKAALRIRGPKAYLNFPIDTVTKASSSALFGHGCAYLGNKETSCGSRKRGSRCDGEEFVDLMMTNEQPATKKVARFEGMLENDELDVFVFQDLGSEYLDNLLSSF* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0516 283 PRINTS Ethylene responsive element binding protein signature 161 177 IPR001471 GO:0003700|GO:0006355
Aev04g0516 283 PRINTS Ethylene responsive element binding protein signature 138 149 IPR001471 GO:0003700|GO:0006355
Aev04g0516 283 ProSiteProfiles AP2/ERF domain profile. 137 195 IPR001471 GO:0003700|GO:0006355
Aev04g0516 283 SMART rav1_2 137 201 IPR001471 GO:0003700|GO:0006355
Aev04g0516 283 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF091 16 283 - -
Aev04g0516 283 Gene3D AP2/ERF domain 136 197 IPR036955 GO:0003700|GO:0006355
Aev04g0516 283 SUPERFAMILY DNA-binding domain 137 197 IPR016177 GO:0003677
Aev04g0516 283 Pfam AP2 domain 137 187 IPR001471 GO:0003700|GO:0006355
Aev04g0516 283 CDD AP2 136 197 IPR001471 GO:0003700|GO:0006355
Aev04g0516 283 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 16 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0516 Aev-Chr4 3203550 3204401 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0516 14 283 AP2-EREBP Transcription Factor Family AT4G18450 35.312 9.94e-39 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Aev04g0516 AP2 3.3e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0516 - - lang:109334345 332.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g0516 04 3203550 3204401 Aev04g0516 04 3203550 3204401 ECH