Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0487 ATGCCCACTCCTCTTCCTCCTCCTTCTTCTTCTTCTTCTATTTGGGTACTATCTAATATAAAGCTTCAATTCTTTGGCCGCATCAGAAGGTTTCTACAATCAAAAGCAACCCGAAAGCGCGGGACCCAATCGAAAAATAGAGTTGAGCAGAGCAACGACAAGGCTGAGAAACTCGAAACAGTTCAAGTCATGAAGAAGCATGAAGAAGAGGAATCCGCAATTCTGTTGCAGAGGACAGTGAAGAAGCTCCACTTCGGAAACTGGGAAGAGAAGGAGTTGGCAGCAAAAGATATTGAAAAGTTAGCCAAAGAAGAAGATGTTAAGGTTAGAAAGTTGATAACAGGGCTTGGGGTGGTGCCTGTATTGGTCTCTATGGCTGTTTCCGACGTGGCTAGCCGCCGGAGAGCAGCGTTGACGGCGTTGATCCACCTTGCTGATGGAACCTACTCGAACAAGGCTTTGATAGTGGAGGCAGGACTATTATCCAAGCTGCCAAAAACAATTGACCTAATGGATCAATCAACAATTAGTCAATTTTCAGAGTTGCTCCTATCTTTGTCATCACTAGTGAACACCCAATTCCATTTTCCTTCATTAGACTTTCTCCCATTACTTAGAAACACTCTTGAGTCATGCACAAATTTTGATACAAAAAGATCATGCTTGGGTGCCTTATACAACCTCTCAACCGTGTTAGAGAATGCAACACCTTTGGTTTCTAGTGGTGTTGTGCCTACCCTATTAGAACTTTCCTCAATCAAAGAGGTTTCAGAGAAATCACTAGCCACATTAGGGAACTTGTTGGTGACTATGATGGGAAAGAAAGCTATAGAGAATAGCTCAATGGTTCCACAATGCTTCATTGAGATATTGTCATGGGAAGACAAACCAAAATGCCAAGAGTTATCAGTTTATATTTTGATGATCTTAGCACATCAAAGCTCATCTCAAAGGGAGAAAATGGCACATGCTGGGATTGTGCATGCACTTCTTGAAGTGGTTCTGTTGGGGAGCCCTTTAGCCCAGAAGAGGGCGCAGAAACTTCTGCAATGGTTCAAGGATGAGCGGCAAACTAGAATGGGCCCACATTCAGGCCCACAAACACCAAGGTTTGCAATGGGGTCACCGGTGAATCAAAGGGAAGCAACACAAGGGAAGAAGTTGATGAAGAGTTTGGTGAAACAGAGTTTGCATAGGAACATGGAAATTATAACACAGAGGGCAAGTGCTGCTGGGGAATCTTCTAGATTGAAGTCATTGGTTATCAGCACAAGTTCTAAGAGTTTGCCTTATTAA 1296 0.4329 MPTPLPPPSSSSSIWVLSNIKLQFFGRIRRFLQSKATRKRGTQSKNRVEQSNDKAEKLETVQVMKKHEEEESAILLQRTVKKLHFGNWEEKELAAKDIEKLAKEEDVKVRKLITGLGVVPVLVSMAVSDVASRRRAALTALIHLADGTYSNKALIVEAGLLSKLPKTIDLMDQSTISQFSELLLSLSSLVNTQFHFPSLDFLPLLRNTLESCTNFDTKRSCLGALYNLSTVLENATPLVSSGVVPTLLELSSIKEVSEKSLATLGNLLVTMMGKKAIENSSMVPQCFIEILSWEDKPKCQELSVYILMILAHQSSSQREKMAHAGIVHALLEVVLLGSPLAQKRAQKLLQWFKDERQTRMGPHSGPQTPRFAMGSPVNQREATQGKKLMKSLVKQSLHRNMEIITQRASAAGESSRLKSLVISTSSKSLPY* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0487 431 SMART arm_5 191 230 IPR000225 GO:0005515
Aev04g0487 431 SMART arm_5 231 269 IPR000225 GO:0005515
Aev04g0487 431 SMART arm_5 148 188 IPR000225 GO:0005515
Aev04g0487 431 SMART arm_5 106 146 IPR000225 GO:0005515
Aev04g0487 431 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 64 431 - -
Aev04g0487 431 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 64 431 - -
Aev04g0487 431 Gene3D - 49 421 IPR011989 -
Aev04g0487 431 MobiDBLite consensus disorder prediction 371 385 - -
Aev04g0487 431 SUPERFAMILY ARM repeat 75 352 IPR016024 -
Aev04g0487 431 MobiDBLite consensus disorder prediction 358 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0487 Aev-Chr4 3042238 3045336 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0487 75 369 U-box Gene Family AT1G67530 30.492 9.38e-18 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0487 - - gmx:100813828 642.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g0487 04 3042238 3045336 Aev04g0487 04 3042238 3045336 ECH