Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0470 ATGCCGGATTTCAACGATTCCGTGGCGCCGATGACGGCACCCTCCACAACCACCTCCACACCCACTTCTCGCCCCGTCCCCGTTCGCGAGGACTGCTGGACGGAGGAGGCCTCCGCCACCCTCGTCGACGCGTGGGGCCGCCGATATCTCGAGCTCAACCGCGGAAACCTCCGCCAAAAGGACTGGCAGGACGTTGCCGACACCGTCAACGCCCTCCACGGGCACACAAAGAAGACGCACCGCACCGATGTCCAGTGTAAGAACCGCATCGACACCATCAAGAAGAAGTACAAGGTCGAGAAGGCTAGGGTTACGGTCTCCAACGGCGCCGTTTCGTCAACCTGGCCGTTCTTTGAGAGATTGGACGCTCTGATTGGCCCTAATTTCAACGCCAAGAAGAATTCCTCTTCGCCATCGCCGTCGCCTCCGGTGGCTCTCCCGTTGATGCCGTATCGGAAGGCAGTGGCGACGCCTTCTCCTGTATCAGCGGTGCCTCCCACCGCCTTGGCGCTGCCACAGAAGCGGTCGGCGGTGGCGATAGACGACGGGTACTTCAGGAGGAATTATTCAGCGATGGCAGCTGCAGCTGCGGCTGCGGAGGCAGACGAGGAGGATGAGGATGAAGAGGATGATGAGGAGGAGGAAGAGGAAGATGATGAAGTTGATGTTGGGAGGGGGAGCGAGGTAGAGGAAGGAGAGAGGGATAGGGAAGGGATGAGGAGGTTGGCGAAGGCAATAGAGAGGTTTGGGGAAGTGTATGAGAGAGTTGAGGGGCAGAAGCTGAGGCAGATGGTGGATTTGGAGAAGCAGAGGATGCAGTTCGCTAAGGATCTTGAGGTGCAGAGGATGCAGATGTTTATGGACACTCAGGTTCAGTTGGAGAGGATCAAGCGCGGGAAGAGATCTGGGTCTAATGTTGTAGAACAACTTGGGAAGCTGGATTTGGAGGAGTACTTGGTAGGGGACTAA 969 0.5759 MPDFNDSVAPMTAPSTTTSTPTSRPVPVREDCWTEEASATLVDAWGRRYLELNRGNLRQKDWQDVADTVNALHGHTKKTHRTDVQCKNRIDTIKKKYKVEKARVTVSNGAVSSTWPFFERLDALIGPNFNAKKNSSSPSPSPPVALPLMPYRKAVATPSPVSAVPPTALALPQKRSAVAIDDGYFRRNYSAMAAAAAAAEADEEDEDEEDDEEEEEEDDEVDVGRGSEVEEGERDREGMRRLAKAIERFGEVYERVEGQKLRQMVDLEKQRMQFAKDLEVQRMQMFMDTQVQLERIKRGKRSGSNVVEQLGKLDLEEYLVGD* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0470 322 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 16 305 IPR044823 -
Aev04g0470 322 MobiDBLite consensus disorder prediction 195 238 - -
Aev04g0470 322 MobiDBLite consensus disorder prediction 199 226 - -
Aev04g0470 322 Gene3D - 33 99 - -
Aev04g0470 322 Coils Coil 196 218 - -
Aev04g0470 322 MobiDBLite consensus disorder prediction 9 25 - -
Aev04g0470 322 PANTHER OS05G0560600 PROTEIN 16 305 - -
Aev04g0470 322 MobiDBLite consensus disorder prediction 1 29 - -
Aev04g0470 322 Pfam Myb/SANT-like DNA-binding domain 30 124 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0470 Aev-Chr4 2939407 2941018 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0470 240 304 Trihelix Transcription Factor Family AT3G14180 50.746 2.82e-15 74.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Aev04g0470 Myb_DNA-bind_4 2.9e-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0470 - - gmx:100815241 405.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g0470 04 2939407 2941018 Aev04g0470 04 2939407 2941018 ECH