Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0464 ATGTCGGAAGAATATGATGATGATGATGATGAGAAAGAGGAAGAAAGTAGTAGTTCATTGGGATCATGGTCGCAGAAATACTGCTACTCTTGTTGTTTTGATTTGAATGAAGAGGCGGGTAGCAGTGAGGAGGAGGAAGAGAAAGAGATAGCAGCATCAATGAATAATAATAAAAATGAGGGAATTATTAGTACTAGTACTTGGCCATCAGGAGATGATGATAATAGAGGAATAAGTAGATCAAGTGGAAGTGGAGTTAGACAATATGTGAGGAGATCGAAGCTGCCTCGCCTTCGCTGGACTCCTCAACTTCATCTCTCCTTTCTCCATGCTCTTCACAGCCTTGGCGGTCAAGGCAGAGCAACGCCCAAGCTAGTGCTTCAGCTAATGAATGTGAGAGGACTCAGCATTGCTCATGTTAAGAGTCACTTGCAGATGTATCGGAGCAAGAAACTTGACGAGGCGGGCCAAGTATTAAGTCAAGCGTACAGATCATCGAGCCAAGAAGAAGAAGAAGCAGGTCATCGTTTACTGCAACAACAACAGTCCACGAGTACGAGTACGAGTAGTAGTAGTCATTTGCAAGGCCTAATAATGCATTATCCCCATCAATTGATGATGTACTCGAACCAATATCAACCTCCTTTGGGAGTAGCATTAGCAGCTTCTTCACCCAGCAGAATTGCACCAATTAGACCAGCAAGCCAGTTGCTGCTTGAAGATCATAATAAAAAGTGGCCTCCATTACAACATATTGTCACCACCATCAACAATCACAATCATCAATTTGGTACCACCATGCCTGATGAATCTGTAATTCACCCGTGCTTTAACGGGAACAGCACAAGCAGTAGTATCAGGAGGGAATATCTATCAATGCCCAATAATAGTTCAAACCCAGAATTTGATGAGCCCCCATTTCTGATAAAGCAATTGAATGAAGAAAAGAGAATGCATGAGAGGAAGGAGCAACAGTTGACTGATTTGCAGTTAGGTTTGATGAGTAGTCAGCTGGGACTGGGAGATAATAATGGAACCGATCATTGCAGTTGCAGTTGCAGTTGCAGAGAAGAAATCAGCACTAAGCTTTCACTTTAA 1098 0.4271 MSEEYDDDDDEKEEESSSSLGSWSQKYCYSCCFDLNEEAGSSEEEEEKEIAASMNNNKNEGIISTSTWPSGDDDNRGISRSSGSGVRQYVRRSKLPRLRWTPQLHLSFLHALHSLGGQGRATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDEAGQVLSQAYRSSSQEEEEAGHRLLQQQQSTSTSTSSSSHLQGLIMHYPHQLMMYSNQYQPPLGVALAASSPSRIAPIRPASQLLLEDHNKKWPPLQHIVTTINNHNHQFGTTMPDESVIHPCFNGNSTSSSIRREYLSMPNNSSNPEFDEPPFLIKQLNEEKRMHERKEQQLTDLQLGLMSSQLGLGDNNGTDHCSCSCSCREEISTKLSL* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0464 365 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 92 152 IPR017930 -
Aev04g0464 365 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 1 172 IPR044848 GO:0003700
Aev04g0464 365 MobiDBLite consensus disorder prediction 1 15 - -
Aev04g0464 365 SUPERFAMILY Homeodomain-like 95 150 IPR009057 -
Aev04g0464 365 MobiDBLite consensus disorder prediction 54 85 - -
Aev04g0464 365 Pfam Myb-like DNA-binding domain 98 148 IPR001005 -
Aev04g0464 365 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 238 365 - -
Aev04g0464 365 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 238 365 IPR044848 GO:0003700
Aev04g0464 365 MobiDBLite consensus disorder prediction 162 193 - -
Aev04g0464 365 Gene3D - 95 152 - -
Aev04g0464 365 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 96 151 IPR006447 GO:0003677
Aev04g0464 365 MobiDBLite consensus disorder prediction 1 22 - -
Aev04g0464 365 MobiDBLite consensus disorder prediction 40 85 - -
Aev04g0464 365 MobiDBLite consensus disorder prediction 177 193 - -
Aev04g0464 365 Coils Coil 309 332 - -
Aev04g0464 365 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 1 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0464 Aev-Chr4 2907505 2909013 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0464 86 165 G2-like Transcription Factor Family AT2G42660 66.250 6.92e-29 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aev04g0464 Myb_DNA-binding 4e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0464 - - adu:107468251 182.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g0464 04 2907505 2909013 Aev04g0464 04 2907505 2909013 ECH
Aev03g2613 03 26652294 26655238 Aev04g0464 04 2907505 2909013 PCT