Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0450 ATGGAAGGTGTCAAGGTGGTAGCTTGGCTCTTTTGCTTGTTTGTGTGGAGCTGGGTGCCAATGGTTGTTGATGCCACTGATAGCCTTCTCTCTCCAAAGGGGGTCAACTTTGAAGTGGCTGCTTTGATGTCCATGAAGAATAAAATGAATGATGAATTGCGTGCCATGGATGGATGGGATATTAATTCGGTTGACCCTTGCACTTGGAACATGGTTGGTTGCTCTGCCGAGGGTTATGTCATTTCCCTGGAAATGGCCAGTGCTGGTTTATCTGGAACACTTTCCTCCGGAATTGGAAATTTGAGCCACCTTCATACATTGTTACTGCAGAACAATAAGTTATCTGGTCCTATTCCGGATGAGATAGGAAAGCTTTTAGAGCTTCAAACTCTTGACCTTTCTGGAAACCAGTTTGTTGGTGCAATTCCTAGTTCTTTGGGCTTTTTGTCTCAACTAAGTTACTTGCGGCTTAACAAAAATAAACTGTCTGGAGAGATCCCTCAACTTGTTGCTAATCTCACAGGCCTTTCGTTTTTGGACTTGTCATTCAATAATCTCAGTGGTCCTACTCCAAAGATTTTAGCAAAAGGTTACAGTATTTCAGGCAATAACTTCCTCTGCACATCTTCATCACAAATTTGTATGGACGTTTCAAAACCACTGAATGATACAGGGTCATCTCAGAAAGACAGGAGTCATCACCAAATGCTGATTTCTGTTGTTATTGGCATTAGTTGCACATTTGTAATTTCAGTGATGCTTGTCTGTTGGCTGCATTGGTACAGATCTCGGATCCTCTATACATCTTATGTGGAGCAAGATTGTGAATTTGATATTGGTCATTTAAAGAGGTTCACCTTCCGTGAATTGCAAGTCGCCACTGGAAATTTCAGTCAAAAGAATATCCTCGGACAAGGTGGCTTTGGTGTTGTTTACAAAGGATGCCTTTCAAACAAGATGTTGGTGGCGGTGAAGAGGCTGAAAGATCCCAATTACACTGGAGAAGTGCAGTTTCAAACTGAAGTTGAGATGATTGGCTTGGCTGTGCATCGCAATCTCTTGCGCCTCTATGGATTTTGTATGACTCCAGATGAAAGGTTACTTGTTTATCCGTATATGCCTAATGGCAGTGTAGCTGATCGCTTGAGAGAAACTTGCCGCGAAAAGCCATCTTTGGACTGGAACAGGCGAATGTATGTTGCTCTTGGGGCGGCTCGTGGACTTCTATACTTACATGAACAATGCAACCCAAAAATAATCCACAGGGATGTTAAGGCAGCAAACATTTTGCTGGATGAGAGTTTTGAAGCTGTGGTGGGGGATTTCGGTCTTGCTAAGTTATTGGATCAGAGGGATTCACATGTAACTACTGCAGTAAGGGGTACCGTAGGGCACATTGCCCCAGAGTATCTCTCAACTGGACAGTCTTCTGAAAAAACAGATGTTTTTGGATTTGGCATACTACTTTTGGAGCTCATAACAGGACAAAAAGCACTAGATGCTGGAAATGGTCAAGTGCAAAAAGGAATGATTCTTGATTGGGTTAAAACGTTATTCGAGGAGAAGCGGCTGGAAGTGTTAGTTGATAGGGACTTGAAGGGATGTTTTGATCCAATGGAGTTAGAAAAGGCAGTGGAGCTGTCTTTGCAGTGCACTCAGTCTCTTCCCAGTCTTAGGCCAAAGATGTCGGAAGTCTTGAAGATTCTAGAAGGCCTTGTCGGGCAGTCAGTGCGGCCGGAGGAGTCTCAAGGAGCTGGAGGAGCTAACATATATGATGAAAGGGCCTGCAGTTTCTCCCAAAATTATAGTGATGTTCATGAAGAACCTTCCTTTATTATTGAAGCCATTGAGCTTTCTGGACCTAGATGA 1869 0.4329 MEGVKVVAWLFCLFVWSWVPMVVDATDSLLSPKGVNFEVAALMSMKNKMNDELRAMDGWDINSVDPCTWNMVGCSAEGYVISLEMASAGLSGTLSSGIGNLSHLHTLLLQNNKLSGPIPDEIGKLLELQTLDLSGNQFVGAIPSSLGFLSQLSYLRLNKNKLSGEIPQLVANLTGLSFLDLSFNNLSGPTPKILAKGYSISGNNFLCTSSSQICMDVSKPLNDTGSSQKDRSHHQMLISVVIGISCTFVISVMLVCWLHWYRSRILYTSYVEQDCEFDIGHLKRFTFRELQVATGNFSQKNILGQGGFGVVYKGCLSNKMLVAVKRLKDPNYTGEVQFQTEVEMIGLAVHRNLLRLYGFCMTPDERLLVYPYMPNGSVADRLRETCREKPSLDWNRRMYVALGAARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDQRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQKALDAGNGQVQKGMILDWVKTLFEEKRLEVLVDRDLKGCFDPMELEKAVELSLQCTQSLPSLRPKMSEVLKILEGLVGQSVRPEESQGAGGANIYDERACSFSQNYSDVHEEPSFIIEAIELSGPR* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0450 622 Pfam Protein kinase domain 298 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev04g0450 622 Gene3D Ribonuclease Inhibitor 35 215 IPR032675 -
Aev04g0450 622 ProSitePatterns Serine/Threonine protein kinases active-site signature. 419 431 IPR008271 GO:0004672|GO:0006468
Aev04g0450 622 SUPERFAMILY Protein kinase-like (PK-like) 281 572 IPR011009 -
Aev04g0450 622 ProSitePatterns Protein kinases ATP-binding region signature. 303 325 IPR017441 GO:0005524
Aev04g0450 622 SUPERFAMILY L domain-like 38 207 - -
Aev04g0450 622 Pfam Leucine rich repeat N-terminal domain 38 75 IPR013210 -
Aev04g0450 622 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 11 622 - -
Aev04g0450 622 Pfam Leucine rich repeat 127 186 IPR001611 GO:0005515
Aev04g0450 622 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 11 622 - -
Aev04g0450 622 ProSiteProfiles Protein kinase domain profile. 297 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev04g0450 622 SMART serkin_6 297 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev04g0450 622 Gene3D Transferase(Phosphotransferase) domain 1 373 578 - -
Aev04g0450 622 Gene3D Phosphorylase Kinase; domain 1 267 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0450 Aev-Chr4 2829691 2832855 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0450 43 622 Receptor kinase-like Gene Family AT5G45780 72.213 0.0 834
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Aev04g0450 Pkinase 5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0450 - - gmx:100810610 1107.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g0450 04 2829691 2832855 Aev04g0450 04 2829691 2832855 ECH