Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0447 ATGGCATCGGAGAAGAAGCTTTCTAACCCAATGAGGGAAATTAAGGTGCAGAAGCTTGTGCTCAACATCTCCGTCGGAGAAAGCGGAGATCGTCTCACCAGGGCCGCCAAGGTCTTGGAGCAATTGAGTGGCCAAACCCCTGTCTTCTCTAAGGCTAGGTACACTGTGCGTTCTTTCGGAATCAGGCGTAACGAAAAGATTGCTTGCTATGTCACCGTGAGGGGTGACAAGGCCATGCAGCTCCTCGAGAGTGGCTTGAAGGTCAAGGAGTATGAACTCCTCAGGAGGAACTTCAGTGACACTGGCTGCTTTGGTTTTGGTATTCAGGAGCACATTGATCTCGGAATCAAGTATGATCCTTCCACTGGTATCTATGGTATGGATTTCTATGTTGTTTTGGAGCGCCCAGGATACCGTGTTGGTCGCCGCAGAAGGTGCAAGTCCTGCGTTGGAATTCAGCACAGGGTCACCAAAGAGGATGCAATGAAGTGGTTCCAAGTTAAGTATGAAGGAGTTATCCTCAACAAGTCCCAGCAAATTACATCTTAG 549 0.49 MASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVGRRRRCKSCVGIQHRVTKEDAMKWFQVKYEGVILNKSQQITS* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0447 182 Gene3D - 2 177 IPR022803 -
Aev04g0447 182 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 1 181 IPR002132 GO:0003735|GO:0005840|GO:0006412
Aev04g0447 182 PIRSF RPL5p_RPL5a_RPL11e_RPL5o 1 172 IPR002132 GO:0003735|GO:0005840|GO:0006412
Aev04g0447 182 Pfam Ribosomal protein L5 9 62 IPR031310 -
Aev04g0447 182 Pfam ribosomal L5P family C-terminus 66 164 IPR031309 -
Aev04g0447 182 PANTHER 60S RIBOSOMAL PROTEIN L11-1 1 181 - -
Aev04g0447 182 ProSitePatterns Ribosomal protein L5 signature. 39 55 IPR020929 GO:0003735|GO:0005840|GO:0006412
Aev04g0447 182 SUPERFAMILY RL5-like 8 173 IPR022803 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0447 Aev-Chr4 2807945 2809009 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0447 1 181 Cytoplasmic Ribosomal Protein Gene Family AT2G42740 95.580 3.12e-129 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0447 K02868 - rcu:8288933 339.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g0447 04 2807945 2809009 Aev04g0447 04 2807945 2809009 ECH