Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0427 ATGACTAGGGCTGTCCGCAATAGGATACTCAAGGATGCAAATGGTGATATCAGTGACCATCTGCGCAACCACATCCATTTAACAAATTGCATTCACTTGAAGAACCATATGCACAAGAACAGCCCCATCCTGGCTGATAGGTCACTCATGAGGGACCTTGTTGTGCTGCAGAGATCGCGTTCGTTAAGGGACCCTTCTGCTAGCCCTCCCTCGTGGCACTCGCCTTCTGTAGTTGATGTGCTTTTCAAAAGAGTTGAAAATGATGCCGTGCTTCAGGGAGGAAGAAAATCTGTAGGCGAGCGGAGGAAGGAAGGGAGGAGATTGTCTGGAACTTCACCACCCTTGGTGAGTATAGGTGCATCGAGGGTTGCTCCAGGGGATCCTATTAGGGTTAATGATGGGGTACCGGCAATTAGTGAGCGCAGTAGTAGGAGTGGAGTTGGGGATGGGAGGAGAGTTGGGAGAGAAGAATCCAGTAGGAAGAGTGATAGGCCTGATTATTTGGATGTTAGTCAAGAGCAACCTCTCAGTCAAGCCTGCAAAAGTTTGGCTGAAGATGTTGCTTCAAGGCATTCTGAATCTAAAGAGAGAAAGAGCAAACCTAGAGGTAAGAATGTTCGAGATGTTCAAGTTAAGACCCTCTCTGAGCAGCTCAATGATGTTCCATTGGATAGTGATGATTTAGCATCATCAAACATTCATTTTCGTGGAAGGTTTCCTAGACAGGAGAAAATTATTGAGGAGGCAGAAGGCAGCATGCGCACTCGTGGCAGCAGAGTGAATAGGGTAAAGAGGCGTAAATTTCGAAGTGCGAGAAGAACTCGGGTGGCTACAGCATCAAGAGATACCGAAGCTGAGAAAGAATTGTCTGTGGCTTCCAACTCATTCGCTCATGGTTCAACCCACCAGAAATATCAGCCAGAGGAGGCTGATGAGTACCTTGATGAAAATGTTACTAGGGCTCCAAAAAATGGATGTGGCATTCCCTGGAATTGGTCCAGAATTCATCATAGAGGTAAAACATTCCTTGACATGGCTGGAAGAAGTTTATCTTGTGGATTATCTGACTCAAGGTTAAGGAGAGGGGCATTAAATGCCAACGGAAGAAATGTTTCTGAAATGCCTTTGGCATCTGAGCACTCAAGTTCATCCACTAAATCTGATGCAGAGGCACTGCCTCTACTAGTTGATGCATCTGGATCTCATGGAAGCACTGAAAATGCTTGTTGGGACCATGACTATTCTGGGGAACTAGGACTTTTTGGTGATAATTTGTTCAAGCATGATATTGATTCTGACCTTGCTTCTGAAGCTAGATCTGGTGGTCAGCATAAATTGAGAGGGAACCGTCATGGTAGACACCAAAGCTTAACACAAAAATATATGCCACGAACCTTCAGAGATATGGTTGGACAGAATTTAGTGGCACAAGCTCTTTCAAATGCAGTAATGAGGAGGAAAGTTGGTTTACTGTATGTGTTTTATGGTCCCCATGGCACCGGAAAAACTTCCTGTGCTCGCGTATTTGCCAGAGCTTTGAACTGTAGTTCTTCAGAACACCCAAAACCTTGTGGCTTTTGCAATTATTGCATAGCACACGATATGGGCAAGAGTAGAAATATAAGGGAAGTTGGTCCAGTCAGTAATTTTGACTTTGAGAACATCATGGATCTTCTTGACAATATGATTGTATCTCAGCTTCCATCACAATACAGAGTGTTTATTTTTGATGACTGTGATACTTTGTCAGCAGATTGTTGGAATGCTATATCAAAGGTCATTGATCGAGCACCTAGACGTCTGGTTTTTATCCTTGTCAGTTCTAGTCTTGATGTCTTGCCTCATATAATAATATCCAGGTGTCAAAAATTCTTTTTCCCGAAGTTGAAGGATGCAGATATTATATATACATTGCAGAGGATTGCAACCAAGGAAGGTCTAGAAATTGATAAGGATGCCCTGAAACTCATCGCATCAAGATCAGATGGATCGTTGAGAGATGCTGAGATGACCCTTGAACAACTAAGTTTGCTTGGCCAGAGAATATCTGTCCCTCTTGTTCAGGAACTGGTAGGGCTTATCTCTGATGAGAAATTGGTCGATCTGCTTGATTTGGCATTATCTGCTGACACAGTCAACACAGTGAAGAATTTGAGAGTGATCATCGAAACTGGAGTTGAGCCATTAGCGTTAATGTCACAACTTGCAACAGTAATTACTGATATACTTGCTGGGACATATGACTTCACAAAAGAAAGGCGAAGAAGGAAATTCTTCCGAAGACTTCCATTGTCCAAAGAAGACATGGAAAAGCTCCGCCAAGCTCTGAAAACTTTATCTGAGGCTGAGAAGCAGTTGAGGATGTCAAATGACAAGCTCACATGGTTGACAGCTGCATTGCTTCAACTTGCTCCTGACCAGCAATATGTGATGCCTACTTCATCTGATAATAGTTTCAACCATAGTCCCTTAGCTCTGAACAATGCAGATGTGAGAGAAACAGCCAGAATAACTGGTAATCCTGTTGAAATCCCTAACAAAGCAGGGCGATTATCAATGGAGTCTAGATTGGAAAATTTCCACTCTGGAAGCTCAGCTAGTGGTATGACAAAGGGTCTTAGTTCAGATAAAAGAAGACTTAGTGTGTCTGGTTTTGCTCCTCAGCAAACTTATTCTCATCAAAGCAATAAGAATAGGATGAATGAAAAGCAGATTTTGGGCAAAAACCGCAAAGAAATTGAAGAGATATGGTTAGAGGTTCTTGACAGGATTCAAGTTACAGGCCTGAAAGAGTTTTTGTATAAAGAAGGCAAGCTGATCTCTGTTAGTTTTGGGGCAGCTCCAACTGTGCAGCTAATTTTTAGCTCTCAACTGACCAAATCAACGGCTGAGAAGTTCACCGGTCATATATTACAAGCATTTGAATCTGTCCTTGGATCTTCTGTAACTATAGAAATTAGATGTGAGCCAAACAAAGATGCAACAGGCTCAGCTGTTCAACTGCCTCTTACATTGCCTGCTATTAATGATACTTCATCTCAGATTAGTGTTGACCCTCAACCTCATCCTTCACTAGCCGATTCTGATGGAAAGAGAATGGGTGAAATTGTTGAAGAAGCAGCTTCTCCAGTAGAGCACAAGCAGCAAGCTGATGCTCATGCACAAAACTATGGAAGTCTAGAAGGTACAAGTATAGGACAAGCATCATCTTCCCAAAAAAAGGCAACTGCGAAGTCTCATTTAGACCGAAGAAAGCTCAGGGAACAAGGTCAAAGTCGAAGTATCGTACGAAGTAAGGTATCTCTTGCTCATGTAATCCAGCAGGCGGAAAGCCAACGAAGTGGGTGGTCTAAACGCAAAGCAGTTTCTATTGCTGAAAAGCTTGAACAAGAGAATCTGAGACTAGAACCAAGATCAAGGAGTGTACTATGCTGGAAAGCTTCAAAAGCAACCCGTCAGAAGCTGTCACGCTTGAAAATTCGAACCCGAAAACCACGTGCGTTGCTGAATCTTGTCTCATGTGGGAAATGCCTCTCTTCAAAATCTCCAAGATAG 3555 0.4301 MTRAVRNRILKDANGDISDHLRNHIHLTNCIHLKNHMHKNSPILADRSLMRDLVVLQRSRSLRDPSASPPSWHSPSVVDVLFKRVENDAVLQGGRKSVGERRKEGRRLSGTSPPLVSIGASRVAPGDPIRVNDGVPAISERSSRSGVGDGRRVGREESSRKSDRPDYLDVSQEQPLSQACKSLAEDVASRHSESKERKSKPRGKNVRDVQVKTLSEQLNDVPLDSDDLASSNIHFRGRFPRQEKIIEEAEGSMRTRGSRVNRVKRRKFRSARRTRVATASRDTEAEKELSVASNSFAHGSTHQKYQPEEADEYLDENVTRAPKNGCGIPWNWSRIHHRGKTFLDMAGRSLSCGLSDSRLRRGALNANGRNVSEMPLASEHSSSSTKSDAEALPLLVDASGSHGSTENACWDHDYSGELGLFGDNLFKHDIDSDLASEARSGGQHKLRGNRHGRHQSLTQKYMPRTFRDMVGQNLVAQALSNAVMRRKVGLLYVFYGPHGTGKTSCARVFARALNCSSSEHPKPCGFCNYCIAHDMGKSRNIREVGPVSNFDFENIMDLLDNMIVSQLPSQYRVFIFDDCDTLSADCWNAISKVIDRAPRRLVFILVSSSLDVLPHIIISRCQKFFFPKLKDADIIYTLQRIATKEGLEIDKDALKLIASRSDGSLRDAEMTLEQLSLLGQRISVPLVQELVGLISDEKLVDLLDLALSADTVNTVKNLRVIIETGVEPLALMSQLATVITDILAGTYDFTKERRRRKFFRRLPLSKEDMEKLRQALKTLSEAEKQLRMSNDKLTWLTAALLQLAPDQQYVMPTSSDNSFNHSPLALNNADVRETARITGNPVEIPNKAGRLSMESRLENFHSGSSASGMTKGLSSDKRRLSVSGFAPQQTYSHQSNKNRMNEKQILGKNRKEIEEIWLEVLDRIQVTGLKEFLYKEGKLISVSFGAAPTVQLIFSSQLTKSTAEKFTGHILQAFESVLGSSVTIEIRCEPNKDATGSAVQLPLTLPAINDTSSQISVDPQPHPSLADSDGKRMGEIVEEAASPVEHKQQADAHAQNYGSLEGTSIGQASSSQKKATAKSHLDRRKLREQGQSRSIVRSKVSLAHVIQQAESQRSGWSKRKAVSIAEKLEQENLRLEPRSRSVLCWKASKATRQKLSRLKIRTRKPRALLNLVSCGKCLSSKSPR* 1185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0427 1184 MobiDBLite consensus disorder prediction 93 208 - -
Aev04g0427 1184 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 179 1151 - -
Aev04g0427 1184 TIGRFAM dnaX_nterm: DNA polymerase III, subunit gamma and tau 455 803 IPR012763 GO:0003887|GO:0005524|GO:0006260|GO:0009360
Aev04g0427 1184 MobiDBLite consensus disorder prediction 258 274 - -
Aev04g0427 1184 MobiDBLite consensus disorder prediction 251 290 - -
Aev04g0427 1184 SMART AAA_5 488 629 IPR003593 -
Aev04g0427 1184 CDD HLD_clamp_pol_III_gamma_tau 629 692 IPR045085 -
Aev04g0427 1184 Pfam DNA polymerase III subunits gamma and tau domain III 685 747 IPR022754 GO:0003887
Aev04g0427 1184 Gene3D - 630 692 - -
Aev04g0427 1184 SUPERFAMILY post-AAA+ oligomerization domain-like 700 803 IPR008921 GO:0003677|GO:0006260
Aev04g0427 1184 MobiDBLite consensus disorder prediction 1060 1075 - -
Aev04g0427 1184 Pfam DNA polymerase III, delta subunit 472 629 - -
Aev04g0427 1184 MobiDBLite consensus disorder prediction 145 168 - -
Aev04g0427 1184 MobiDBLite consensus disorder prediction 1060 1094 - -
Aev04g0427 1184 CDD AAA 470 629 - -
Aev04g0427 1184 Gene3D - 447 626 IPR027417 -
Aev04g0427 1184 PANTHER PROTEIN STICHEL-LIKE 3 179 1151 - -
Aev04g0427 1184 MobiDBLite consensus disorder prediction 186 208 - -
Aev04g0427 1184 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 492 676 IPR027417 -
Aev04g0427 1184 Coils Coil 765 792 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0427 Aev-Chr4 2705246 2710523 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0427 455 753 Core DNA Replication Machinery Family AT1G21690 23.684 9.15e-14 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0427 - - gmx:100809005 1908.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g0427 04 2705246 2710523 Aev04g0427 04 2705246 2710523 ECH