Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0385 ATGAGACTTTCTTCAGCTGGTTTTAGTCCTCCACCGCATGAAGGGGAAAAGCGAGTTCTAGACTCAGAGCTCTGGCATGCATGTGCTGGCCCTCTTGTTTCTTTACCTGCAGTTGGAAGCCGTGTGGTATACTTTCCACAAGGTCACAGTGAACAGGTGGCTGTGTCAACCAACAAGGAAGTGGATGCACATATCCCCAACTATCCGAGCTTACCGCCCCAACTCATTTGTCAACTTCATAATCTGACTATGCATGCTGATGTTGAGACTGATGAAGTGTATGCACAGATGACCTTGCAACCTCTGAATCCTCAAGAGCAAAAGGAGGCATACCTTCCAGCAGAGTTGGGTACTCCAAGTAAACAGCCAACAAACTACTTCTGCAAAACTTTGACTGCGAGTGACACAAGCACACATGGGGGATTCTCTGTTCCTCGCCGGGCAGCTGAAAAAGTGTTCCCTCCACTGGACTTCTCCCAACAGCCTCCTGCTCAAGAGTTAATTGCAAGGGATTTGCATGGGAATGAATGGAAATTCAGACATATCTTTCGGGGCCAGCCTAAAAGGCATCTACTTACCACTGGATGGAGTGTATTTGTGAGTGCTAAAAGACTCATTGCTGGTGATTCCGTGCTGTTTATCTGGAATGAAAAGAACCAATTGCTTCTTGGCATCCGGCGTGCTAATCGACCACAAACTGTGATGCCTTCCTCAGTGTTGTCGAGTGATAGCATGCACTTGGGGCTTCTTGCTGCAGCAGCTCATGCAGCTGCAACAAATAGCCGGTTCACCATTTTCTATAATCCACGCGCTAGCCCATCAGAATTTGTCATACCCTTAACGAAGTATGTTAAAGCTGTGTATCATACACGAGTTTCAGTTGGTATGCGCTTCAGGATGCTGTTTGAAACTGAGGAGTCAAGTGTGCGGAGATACATGGGTACAATAACTGGCATTAGTGACTTGGATCCTGCCCGGTGGCCAAATTCACATTGGCGCTCAGTCAAGGTTGGCTGGGATGAATCTACTGCTGGAGAGAGGCAGCCTCGAGTGTCTTTGTGGGAAATTGAGCCATTAACAACCTTTCCTATGTATCCATCGCCATTTCCCCTTAGGCTCAAACGCCCTTGGCCTCCAGGACTGCCTTCATTCCACGGAATGAAGGATGATGATTTTGGGATTAATTCTCCGCTGATGTGGCTTCGAGACACTGATAGAGGGCTTCAGTCTCTTAATTTCCAGGGGATTGGAGTTAGTCCTTGGATGCAGCCAAGGTTTGATCCCTCCCTGCTGAATATGCAAACTGATATGTATCAAGCCGTTGCTGCTGCTGCTCTTCAGGATATACGGACTTTAGATCCTTCCAAACAGCATCCTGCTTCGTTACTTCAATTCCAGCAACCACAGAACTTCCCAAACAGGACTGCTGCTTTAATGCATTCCCAGATGATGCAGCAGCCACAACCTCAGCAATCTTTTCAAAGTAATCAAGAGAATCAGCATCCTCCCCAATCTCAGTCACAAACTCAGATGCATCTTCAGCAGCAACTACAGCATCAGAACTCATTAAATAGTCAACATCATCACCACAACCAGCAATCACAACCACAAATGCAACAACAACAGCAACCACAACAACTGGTAGAGAATCCGCAGATTTCCAGTGCTGTCTCTACAATGTCTCAGTTTGTTTCAGCACCTCAACCTCAATCACCACCAATGCAAGCTATCTCTTCACTGTGTCAACAGCAAAGTTTTTCTGATTCAAATGGAAACCCTGTGGCCACTGCTAATGTTTCTCCCCTGCACAGCATCTTGGGTTCATTTCCCCAGGATGAGACAACTCACCTTATGAACCTTCCTAGAACTAGCTCTTGGGTTCCTGTTCAAACTTCAGGTGCATGGCCCTCCAAGCGAGTGGCAGTGGATCCTCTCCTTTCTTCCGGGGCATCTCAGTGTATTCTGCCTCAGGTGGAGCAGTTAGGGCAGCCACAGAGTACCATGTCTCAAAATGCTATTACATTGCCGCCCTTTCCTGGTAGGGAGTGCTCAATAGACCAAGAAGGAAGTACTGATCCACAAAACCATCTGTTATTTGGTGTTAATATAGAGCCCTCATCTCTTCTAGTGCATAATGGGATGTCAAACCTTAAGGGGGTCGGCACCAATAACAATACCTCAACCATGCCCTTCCAATCCTCTAATTACCTGAATACCACAGTCACCGATTCTTCATTGAATCCTGGAATGACGCATAGCATTGGTGATTCAAGCTTCCTGCAGACCGCAGAAAATGCGGGGCAAGGAAACTCAACAAACAAAACCTTTGTTAAGGTTTATAAATCAGGGTCCTTCGGAAGATCACTGGATATAACTAAATTCAGCAGCTACCATGAGCTGCGCAGTGAGCTGGCTCGCATGTTTGGCCTTGAAGGCGAGTTGGAGGACCCTGTGAGATCAGGCTGGCAGCTTGTATTTGTAGACCGAGAGAATGATGTTCTTCTCCTCGGCGATGGGCCCTGGCCGGAATTCGTAAATAGTGTATGGTGCATCAAGATACTTTCGCCACAAGAAGTGCAGCAAATGGGCAACTCCGGCCTCGAGCTCTTGAACTCGGTTCCCGTTCAGAGGCTCTCTAATGGCATCTGCGATGACTATCCTAAGCAAATCCACGAGATTAAGGATTTCCTTCTCACTGCCAGAAGGAAGGATGCTAGGTCAGTGAAAATCAAGAGGAGCAGAGATGTGGTCAAGTTCAAGGTCAGATGCTCAAAGTACCTCTACACACTCTGTGTCTTTGACCCTGAGAAAGCTGATAAGTTGAAGCAGTCACTTCCTCCTGTTGGAAGCCGTGTGGTATACTTTCCACAAGGTCACAGTGAACAGGCTGATGTTGAGACTGATGAAGTGTATGCACAGATGACCTTGCAACCTCTGATCCTCAAGAGCAAAAGGAGGCATACCTTCCAGCAGAGTTGGGACTTCTCCCAACAGCCTCCTGCTCAAGAGTTAATTGCAAGGGATTTGCATGGGAATGAATGGAAATTCAGACATATCTTTCGGGGCCAGCCTAAAAGCATCTACTTACCACTGGATGGAGTTGGTATGCGCTTCAGGATGCTGTTTGAAACTGAGGAGTCAAGTGTGCGGAGATACATGGGTACAATAACTGGCATTAGTGACTTGGATCCTGCCCGGTGGCCAAATTCACATTGGCGCTCAGTCAAGGTTGGCTGGGATGAATCTACTGCTGGAGAGAGGCAGCCTCGAGTGTCTTTGTGGGAAATTGAGCCATTAACAACCTTTCCTATGTATCCATCGCCATTTCCCCTTAGGCTCAAACGCCCTTGGCCTCCAGGACTGCCTTCATTCCACGGAATGAAGGATGATGATTTTGGGATTAATTCTCCGCTGATGTGGCTTCGAGACACTGATAGAGGGCTTCAGTCTCTTAATTTCCAGGGGATTGGAGTTAGTCCTTGGATGCAGCCAAGGTTTGATCCCTCCCTGCTGAATATGCAAACTGATATGTATCAAGCCGTTGCTGCTGCTGCTCTTCAGGATATACGGACTTTAGATCCTTCCAAACAGCATCCTGCTTCGTTACTTCAATTCCAGCAACCACAGAACTTCCCAAACAGGACTGCTGCTTTAATGCATTCCCAGATGATGCAGCAGCCACAACCTCAGCAATCTTTTCAAAGTAATCAAGAGAATCAGCATCCTCCCCAATCTCAGTCACAAACTCAGATGCATCTTCAGCAGCAACTACAGCATCAGAACTCATTAAATAGTCAACATCATCACCACAACCAGCAATCACAACCACAAATGCAACAACAACAGCAACCACAACAACTGGTAGAGAATCCGCAGATTTCCAGTGCTGTCTCTACAATGTCTCAGTTTGTTTCAGCACCTCAACCTCAATCACCACCAATGCAAGCTATCTCTTCACTGTGTCAACAGCAAAGTTTTTCTGATTCAAATGGAAACCCTGTGGCCACTGCTAATGTTTCTCCCCTGCACAGCATCTTGGGTTCATTTCCCCAGGATGAGACAACTCACCTTATGAACCTTCCTAGAACTAGCTCTTGGGTTCCTGTTCAAACTTCAGGTGCATGGCCCTCCAAGCGAGTGGCAGTGGATCCTCTCCTTTCTTCCGGGGCATCTCAGTGTATTCTGCCTCAGGTGGAGCAGTTAGGGCAGCCACAGAGTACCATGTCTCAAAATGCTATTACATTGCCGCCCTTTCCTGGTAGGGAGTGCTCAATAGACCAAGAAGGAAGTACTGATCCACAAAACCATCTGTTATTTGGTGTTAATATAGAGCCCTCATCTCTTCTAGTGCATAATGGGATGTCAAACCTTAAGGGGGTCGGCACCAATAACAATACCTCAACCATGCCCTTCCAATCCTCTAATTACCTGAATACCACAGTCACCGATTCTTCATTGAATCCTGGAATGACGCATAGCATTGGTGATTCAAGCTTCCTGCAGACCGCAGAAAATGCGGGGCAAGGAAACTCAACAAACAAAACCTTTGTTAAGGTTTATAAATCAGGGTCCTTCGGAAGATCACTGGATATAACTAAATTCAGCAGCTACCATGAGCTGCGCAGTGAGCTGGCTCGCATGTTTGGCCTTGAAGGCGAGTTGGAGGACCCTGTGAGATCAGGCTGGCAGCTTGTATTTGTAGACCGAGAGAATGATGTTCTTCTCCTCGGCGATGGGCCCTGGCCGGAATTCGTAAATAGTGTATGGTGCATCAAGATACTTTCGCCACAAGAAGTGCAGCAAATGGGCAACTCCGGCCTCGAGCTCTTGAACTCGGTTCCCGTTCAGAGGCTCTCTAATGGCATCTGCGATGACTATGTGAGCCGTCAAGACCCGCGAAATTTGAGCTCTGGGATAACAACTGTGGGGTCTTTAGACTACTGA 4944 0.4729 MRLSSAGFSPPPHEGEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNKEVDAHIPNYPSLPPQLICQLHNLTMHADVETDEVYAQMTLQPLNPQEQKEAYLPAELGTPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLIAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLTKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPPGLPSFHGMKDDDFGINSPLMWLRDTDRGLQSLNFQGIGVSPWMQPRFDPSLLNMQTDMYQAVAAAALQDIRTLDPSKQHPASLLQFQQPQNFPNRTAALMHSQMMQQPQPQQSFQSNQENQHPPQSQSQTQMHLQQQLQHQNSLNSQHHHHNQQSQPQMQQQQQPQQLVENPQISSAVSTMSQFVSAPQPQSPPMQAISSLCQQQSFSDSNGNPVATANVSPLHSILGSFPQDETTHLMNLPRTSSWVPVQTSGAWPSKRVAVDPLLSSGASQCILPQVEQLGQPQSTMSQNAITLPPFPGRECSIDQEGSTDPQNHLLFGVNIEPSSLLVHNGMSNLKGVGTNNNTSTMPFQSSNYLNTTVTDSSLNPGMTHSIGDSSFLQTAENAGQGNSTNKTFVKVYKSGSFGRSLDITKFSSYHELRSELARMFGLEGELEDPVRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPQEVQQMGNSGLELLNSVPVQRLSNGICDDYPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDPEKADKLKQSLPPVGSRVVYFPQGHSEQADVETDEVYAQMTLQPLILKSKRRHTFQQSWDFSQQPPAQELIARDLHGNEWKFRHIFRGQPKSIYLPLDGVGMRFRMLFETEESSVRRYMGTITGISDLDPARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPPGLPSFHGMKDDDFGINSPLMWLRDTDRGLQSLNFQGIGVSPWMQPRFDPSLLNMQTDMYQAVAAAALQDIRTLDPSKQHPASLLQFQQPQNFPNRTAALMHSQMMQQPQPQQSFQSNQENQHPPQSQSQTQMHLQQQLQHQNSLNSQHHHHNQQSQPQMQQQQQPQQLVENPQISSAVSTMSQFVSAPQPQSPPMQAISSLCQQQSFSDSNGNPVATANVSPLHSILGSFPQDETTHLMNLPRTSSWVPVQTSGAWPSKRVAVDPLLSSGASQCILPQVEQLGQPQSTMSQNAITLPPFPGRECSIDQEGSTDPQNHLLFGVNIEPSSLLVHNGMSNLKGVGTNNNTSTMPFQSSNYLNTTVTDSSLNPGMTHSIGDSSFLQTAENAGQGNSTNKTFVKVYKSGSFGRSLDITKFSSYHELRSELARMFGLEGELEDPVRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPQEVQQMGNSGLELLNSVPVQRLSNGICDDYVSRQDPRNLSSGITTVGSLDY* 1648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0385 1647 SUPERFAMILY CAD & PB1 domains 769 849 - -
Aev04g0385 1647 SUPERFAMILY DNA-binding pseudobarrel domain 980 1026 IPR015300 -
Aev04g0385 1647 SMART B3_2 127 229 IPR003340 GO:0003677
Aev04g0385 1647 Pfam Ribosomal L38e protein family 887 947 IPR002675 GO:0003735|GO:0005840|GO:0006412
Aev04g0385 1647 Pfam Auxin response factor 253 336 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Aev04g0385 1647 Pfam Auxin response factor 1034 1076 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Aev04g0385 1647 Gene3D - 769 863 - -
Aev04g0385 1647 Gene3D - 1509 1603 - -
Aev04g0385 1647 ProSiteProfiles B3 DNA-binding domain profile. 127 229 IPR003340 GO:0003677
Aev04g0385 1647 Gene3D - 1035 1103 - -
Aev04g0385 1647 Gene3D - 291 363 - -
Aev04g0385 1647 Pfam B3 DNA binding domain 127 228 IPR003340 GO:0003677
Aev04g0385 1647 ProSiteProfiles PB1 domain profile. 774 858 IPR000270 GO:0005515
Aev04g0385 1647 Gene3D - 125 228 IPR015300 -
Aev04g0385 1647 Gene3D - 966 1034 IPR015300 -
Aev04g0385 1647 ProSiteProfiles PB1 domain profile. 1514 1598 IPR000270 GO:0005515
Aev04g0385 1647 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1026 1627 IPR044835 GO:0003677|GO:0006355|GO:0009725
Aev04g0385 1647 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 993 1027 IPR044835 GO:0003677|GO:0006355|GO:0009725
Aev04g0385 1647 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 887 IPR044835 GO:0003677|GO:0006355|GO:0009725
Aev04g0385 1647 MobiDBLite consensus disorder prediction 1220 1335 - -
Aev04g0385 1647 MobiDBLite consensus disorder prediction 480 595 - -
Aev04g0385 1647 CDD B3_DNA 126 227 IPR003340 GO:0003677
Aev04g0385 1647 Gene3D - 886 951 IPR038464 -
Aev04g0385 1647 PANTHER AUXIN RESPONSE FACTOR 993 1027 - -
Aev04g0385 1647 SUPERFAMILY CAD & PB1 domains 1509 1589 - -
Aev04g0385 1647 PANTHER AUXIN RESPONSE FACTOR 1 887 - -
Aev04g0385 1647 SUPERFAMILY DNA-binding pseudobarrel domain 112 256 IPR015300 -
Aev04g0385 1647 PANTHER AUXIN RESPONSE FACTOR 1026 1627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0385 Aev-Chr4 2464030 2479286 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0385 1 483 B3 DNA Binding Superfamily AT1G30330 87.090 0.0 858
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Aev04g0385 AUX_IAA 1.4e-07 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0385 - - gmx:100798719 1513.43