Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0368 ATGGAGGAGGATGAGATTCAAGCACATGCTTCTAAGTTCCCAAGAGTTGGAAACATTGGAAGTAAAATAGCTTCTTCAAGAGTGAACAACAACAATGAGCAGCAGCAGTACCAAGATGAGGAAGAAGATCATGTAGAACTCAGAAGAAGAGGTGGTAGTGATGGAAGCACAAACCGTTTCCACCACCATAACAGCTGGAACAACCACTCTTCAAGGATCATAAGGGTGTCAAGAGCATCTGGTGGAAAAGACAGGCACAGCAAGGTTATGACATCAAAAGGGCTAAGGGACAGAAGAGTTAGGCTCTCTGTAGCCACAGCAATTCAGTTCTACGATCTTCAAGATAGACTTGGCTATGACCAACCTTCAAAAGCAGTGGAGTGGTTAATCAAAGCTGCCTCAGATGCAATCTCAGAGCTACCTTCTCTCAACAGCACTTTCCCTGAAACTCCAAGGCAATTGAGTGATGAGATATCAAGGCCAAGTCTTGTTGTTGGGAGTGAAAGAGAACAGGTAGGCCTGTTTGATGAGATTGATGGAGACAACAACAACCCTCAACAGAACATTTCTTTGTCAAAATCTGCTTGTAGCAGCACCTCTGAGACAAGTAAAGGCTCTGGCTTGTCACTCTCAAGGTCTGAGATTCGTGTCAAGGCAAGGGAGAGGGCAAGGGAAAGAGCAGCTGCAAAGGAGAAAGAAGAGAAAGAGCAAGAGAAAGAGTCTCAAATCAATATTAACAACAATGCACATTATCATCATCATCATCACCACAATAATGCTAATAACAACAACAACACAATGTCTCAAACTGCATCTTTCACTGAGCTACTCACTGGTGGAATCAGTAACAATAACACTAGTAATGGTGATGAGGTTAATCTATTCCACAAGGCAACAACAACAACTAGACAACAACAACATTGGTCTTCAACAGTGACACCAATAATGGACTATTTCAGTCCAGGGCTTTTGGTGGGGACTCCTTCATCTTCAAGGACAACAAATCATCATCATCATCATCAATCATTAATCCAACTTGGAACTAATTCACTTCCTGTTTCACTACCAGCATTCAGTGGTGAGAACAACTCAGATCAGATGCAGCAGCAATTCTCATTCATGCATGACCATCTCATTATGCCTGCAGCAGCAGCAGTTGTTACTTCTTCTTCTTCTTCTCCTCATCATCATGGAGGAGACTACAACCTCAACTTCAGCATCTCCTCTTCTCCTTCTTCAGGGCTTGCTGGTTACAACAATAGGGGGACCCTTCAGTCCAATTCTCATATGTCTCTTTTGCCTCATCATCATCTTCTGAGGTTTTCATCTTTGGATGGATCTTCTTCCAATGTACCTTTCTTCATTGGAGGAGCTACTCAAGCTTCTGCTTCTCCAACCATGGACAACAACAACCATCAACAGTTCTCTTCTTCTGTGTTTGATGGCCACTTGCATCTCTGCTATGGGGATGGAACCAGGCATTCTGATCAAAAGGGTAAAGGCAAGAATTGA 1512 0.4306 MEEDEIQAHASKFPRVGNIGSKIASSRVNNNNEQQQYQDEEEDHVELRRRGGSDGSTNRFHHHNSWNNHSSRIIRVSRASGGKDRHSKVMTSKGLRDRRVRLSVATAIQFYDLQDRLGYDQPSKAVEWLIKAASDAISELPSLNSTFPETPRQLSDEISRPSLVVGSEREQVGLFDEIDGDNNNPQQNISLSKSACSSTSETSKGSGLSLSRSEIRVKARERARERAAAKEKEEKEQEKESQININNNAHYHHHHHHNNANNNNNTMSQTASFTELLTGGISNNNTSNGDEVNLFHKATTTTRQQQHWSSTVTPIMDYFSPGLLVGTPSSSRTTNHHHHHQSLIQLGTNSLPVSLPAFSGENNSDQMQQQFSFMHDHLIMPAAAAVVTSSSSSPHHHGGDYNLNFSISSSPSSGLAGYNNRGTLQSNSHMSLLPHHHLLRFSSLDGSSSNVPFFIGGATQASASPTMDNNNHQQFSSSVFDGHLHLCYGDGTRHSDQKGKGKN* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0368 503 MobiDBLite consensus disorder prediction 176 241 - -
Aev04g0368 503 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 503 IPR005333 GO:0003700
Aev04g0368 503 ProSiteProfiles R domain profile. 213 232 IPR017888 -
Aev04g0368 503 MobiDBLite consensus disorder prediction 37 57 - -
Aev04g0368 503 Coils Coil 218 242 - -
Aev04g0368 503 PANTHER TRANSCRIPTION FACTOR TCP24 1 503 - -
Aev04g0368 503 MobiDBLite consensus disorder prediction 180 210 - -
Aev04g0368 503 MobiDBLite consensus disorder prediction 1 65 - -
Aev04g0368 503 ProSiteProfiles TCP domain profile. 82 140 IPR017887 -
Aev04g0368 503 MobiDBLite consensus disorder prediction 214 241 - -
Aev04g0368 503 Coils Coil 23 50 - -
Aev04g0368 503 Pfam TCP family transcription factor 81 233 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0368 Aev-Chr4 2332888 2334399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0368 66 503 TCP Transcription Factor Family AT4G18390 42.070 7.88e-74 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Aev04g0368 TCP 6.8e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0368 - - gmx:100787772 444.121