Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0360 ATGAGGAGGAATTGCAACTTGGAACTTGGGCTATTCCCTCCCTACAGCAGCAATGAGGATGAGGATGAAGGAATTAGGCAGCAGCAGCAGATTACCATATTCTATGCTGGCAAGATTTGTGTTTCTCATGTCACTGAGCTTCAGGCCAAATCAATATTAATGCTTGCAAATAAAAAAGTGGAGGAAAAAGCAGCATCAACACCAATGACTACTACTACTAGTACTACTCCTACATCAAGGTCCAATAACAAGCAGGCATCATCTTCACCACCAATAATAGTGCAATCAAATAATACTAATAATAATCAATTATTGTATGGCACTGGCACTGGCCTTTCCATGAAAAAATCGTTGCAACGATTCCTTCAGAAGAGAAAGATTCGGATCCAAGAAGCATCCCCCTACAATCGCTAG 414 0.4082 MRRNCNLELGLFPPYSSNEDEDEGIRQQQQITIFYAGKICVSHVTELQAKSILMLANKKVEEKAASTPMTTTTSTTPTSRSNNKQASSSPPIIVQSNNTNNNQLLYGTGTGLSMKKSLQRFLQKRKIRIQEASPYNR* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0360 137 Pfam Jas motif 115 135 IPR018467 -
Aev04g0360 137 ProSiteProfiles Tify domain profile. 24 58 IPR010399 -
Aev04g0360 137 PANTHER - 1 135 - -
Aev04g0360 137 MobiDBLite consensus disorder prediction 60 100 - -
Aev04g0360 137 SMART tify_2 24 58 IPR010399 -
Aev04g0360 137 MobiDBLite consensus disorder prediction 64 100 - -
Aev04g0360 137 Pfam tify domain 27 57 IPR010399 -
Aev04g0360 137 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 1 135 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0360 Aev-Chr4 2276606 2279685 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0360 1 136 Tify Gene Family AT1G30135 38.000 1.76e-21 82.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Aev04g0360 tify 5.6e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0360 - - gmx:100803886 124.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g0360 04 2276606 2279685 Aev04g0360 04 2276606 2279685 ECH