Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0343 ATGTCACTTTCCTGTGCCAAGAACTTCTTCCAGAGGTTCTGGGTGGATGAATTCCAAATGGGAAGTTTTTCACATAGCAGCTTTCTGTCCAATGATCTCTTACCATCTCTTGGAGCAAGAATAAACCAGGAAACTAGGCTCAGAAGATACATAATCTCCCCTTTCAACCCGCGTTATAGGGCTTGGGAGATGTTACTGGTTGTTCTGGTGGTTTACTCAGCTTGGATTTGCCCCTTTGAGTTTGCCTTTCTGTCTTACAAGAGAGACACTCTATTCATCATTGACAACATTGTCAATGGCTTTTTCGCCATCGACATAGTTCTCACATTCTTTGTTGCATATCTTGATAGCCAGTCTTATCTTCTTGTTGATGATCCAAAGAGAATTGCTATCAGGTACATATCTACCTGGTTTGCCTTTGATGTCTGCTCCACAGCACCATTTCAATCCATCAGCCTCCTCTTCACAAATCACAGCAGTGAGCTTGGTTTCAAAGTTCTTAACATGCTCCGGTTATGGCGCCTGAGACGAGTCAGTTCTCTCTTTGCAAGACTCGAAAAGGACATTCGATTCAATTACTTCTGGACTAGGTGCACAAAGCTCATTGCTGTAACATTGTTTGCAGTACACTGTGCTGGATGCTTTAACTATCTAATTGCAGATAGGTACCCGGATCCAAAAAGAACCTGGATTGGTGCAATGTACCCAAATTTCAAAGAACTAAGCCTTTGGGACAGATATGTCACTGCAATATACTGGTCCATTGTAACTCTTACTACCACTGGCTATGGAGATTTACATGCTGAGAATCCAAGAGAGATGTTGTTTGATATCTTCTACATGCTTTTCAACTTGGGTCTAACATCATACATCATTGGAAACATGACTAACCTTGTAGTTCACTGGACCAGCCGCACCAGAAATTTTAGGGACACAGTAAGATCAGCTTCTGAATTTGCTTCAAGAAACCATCTTCCACCTCGGATTCAGGATCAAATGCTATCACACATTTGTCTGAAATTCAAAACAGAAGCACTGAAGCAGCAAGAAACATTGAATGATCTTCCAAAGGCGATTCGTTCGAGCATTTCACATCATCTGTTTTTCCCTGTTGTGGAGAAGGTCTACCTCTTCCAAGGAGTCTCCCATGACTTCCTCTTCCAACTGGTTTCAGAAATGGAAGCTGAGTATTTCCCACCCAAGGAAGATGTCATACTGCAAAATGAGTCTTCTACAGAATTTTATGTCCTGGTTTCAGGGGCAGTGGATCTCATTCGCTATGTTGATGGGCATGAACAAGTTCTTGGGAAAGCAATTGCAGTAGATACTTTTGGAGAGATTGGAGTGTTATATCATATGCCTCAGCCTTTCACTGTTCGGACCAAAGAGCTTTCTCAAATATTAAGACTGAACAGAACATCATTGATGAATGTTTTACATGCAAATCCTGCAGATGCACAAATTGTGATGGATAACCTTTTCATGAGATTAAAAGGGCATGAAGAGTCAGGCTTTGAAAATCCACATACAGAAGTGCTTCATGGAGGCAACAGAAGAGAGTGTTGTTCTCATGAGTGTACTGATAATTCACATGATCATTCATTGACTCAGGAAGGAAACTGCAGAAATTCAGATGCCAGTTTGCATAAGGTGACTCATGATGATCATTTAGTCACAAAATATAACATGTTTACTTTGGATGGAAAAAGAGATCTTCATGCTGCAGCACACAAAGGGAATCTAGACATGGTTGATATTCTGCTTGAAAGAGACGCAAATGCAAAGAACACAAATGCTATTGGGTGGACACAAAAAGCTCTAGCAGAACAGTTAAGAAAAAAGGGCATCTCTGACCAAATAATGGGTTGTGAAAATGAGAAGAAATCAGATGAACATAGGATAGAGGTTGAGGAGCCAGAAATACTTAACCTTGACAGGAATGACTCAACAAGAAACAGAAGGCAAGATGGTGTTAGATCAATCAAGTTCCCATCACAGAAAGTATGCACAAACTCATTTCCTAGAAATTCTAACTGTCATAGTGATAGAGAAACCACTAGGTTCATCAAGAAGAGAGTTACAATCCACTTGCTAAAAGGGAGCATAAGTACCTCACAGGGACAGCATGGGAAGTTGATAATTTTACCTGATTCAATAGAAGAGCTGCTCAAGATTGCTGGTGAAAAATTTGGAGGCATCAACCCTATAAAAGTAATTAACACAGAGAATGCAGAGATAGATGACATAAATGTCATTCGAGATGGAGATCATCTCTTCTTTCTTTGCAGTGATAGTGAAATTTTGACATCATGA 2313 0.4038 MSLSCAKNFFQRFWVDEFQMGSFSHSSFLSNDLLPSLGARINQETRLRRYIISPFNPRYRAWEMLLVVLVVYSAWICPFEFAFLSYKRDTLFIIDNIVNGFFAIDIVLTFFVAYLDSQSYLLVDDPKRIAIRYISTWFAFDVCSTAPFQSISLLFTNHSSELGFKVLNMLRLWRLRRVSSLFARLEKDIRFNYFWTRCTKLIAVTLFAVHCAGCFNYLIADRYPDPKRTWIGAMYPNFKELSLWDRYVTAIYWSIVTLTTTGYGDLHAENPREMLFDIFYMLFNLGLTSYIIGNMTNLVVHWTSRTRNFRDTVRSASEFASRNHLPPRIQDQMLSHICLKFKTEALKQQETLNDLPKAIRSSISHHLFFPVVEKVYLFQGVSHDFLFQLVSEMEAEYFPPKEDVILQNESSTEFYVLVSGAVDLIRYVDGHEQVLGKAIAVDTFGEIGVLYHMPQPFTVRTKELSQILRLNRTSLMNVLHANPADAQIVMDNLFMRLKGHEESGFENPHTEVLHGGNRRECCSHECTDNSHDHSLTQEGNCRNSDASLHKVTHDDHLVTKYNMFTLDGKRDLHAAAHKGNLDMVDILLERDANAKNTNAIGWTQKALAEQLRKKGISDQIMGCENEKKSDEHRIEVEEPEILNLDRNDSTRNRRQDGVRSIKFPSQKVCTNSFPRNSNCHSDRETTRFIKKRVTIHLLKGSISTSQGQHGKLIILPDSIEELLKIAGEKFGGINPIKVINTENAEIDDINVIRDGDHLFFLCSDSEILTS* 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0343 770 PRINTS EAG/ELK/ERG potassium channel family signature 106 115 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aev04g0343 770 PRINTS EAG/ELK/ERG potassium channel family signature 72 79 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aev04g0343 770 PRINTS EAG/ELK/ERG potassium channel family signature 291 300 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aev04g0343 770 PRINTS EAG/ELK/ERG potassium channel family signature 273 284 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aev04g0343 770 PRINTS EAG/ELK/ERG potassium channel family signature 95 105 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aev04g0343 770 PRINTS EAG/ELK/ERG potassium channel family signature 247 264 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aev04g0343 770 PANTHER POTASSIUM CHANNEL AKT1 1 770 IPR045319 GO:0005249|GO:0006813
Aev04g0343 770 Pfam KHA, dimerisation domain of potassium ion channel 691 760 IPR021789 -
Aev04g0343 770 Pfam Cyclic nucleotide-binding domain 397 480 IPR000595 -
Aev04g0343 770 ProSiteProfiles Ankyrin repeat region circular profile. 567 593 - -
Aev04g0343 770 CDD CAP_ED 377 490 IPR000595 -
Aev04g0343 770 SMART cnmp_10 377 494 IPR000595 -
Aev04g0343 770 SUPERFAMILY Voltage-gated potassium channels 54 300 - -
Aev04g0343 770 ProSiteProfiles cAMP/cGMP binding motif profile. 377 496 IPR000595 -
Aev04g0343 770 SUPERFAMILY cAMP-binding domain-like 304 497 IPR018490 -
Aev04g0343 770 SUPERFAMILY Ankyrin repeat 476 620 IPR036770 -
Aev04g0343 770 Gene3D - 548 650 IPR036770 -
Aev04g0343 770 PANTHER INWARDLY RECTIFYING POTASSIUM CHANNEL SUBUNIT 1 770 - -
Aev04g0343 770 Pfam Ion transport protein 60 306 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Aev04g0343 770 ProSiteProfiles KHA domain profile. 692 770 IPR021789 -
Aev04g0343 770 Gene3D - 60 300 - -
Aev04g0343 770 Gene3D Jelly Rolls 344 509 IPR014710 -
Aev04g0343 770 ProSiteProfiles Ankyrin repeat profile. 567 599 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0343 Aev-Chr4 2172378 2176284 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0343 1 765 Ion Channels AT4G18290 60.131 0.0 879
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0343 K21867 - gmx:100811356 1240.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g0343 04 2172378 2176284 Aev04g0343 04 2172378 2176284 ECH