Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0333 ATGATGAATAATACTACTACTACTACTACTACTACTACACCATCATCATCACCATATCCTCCTCCTCTTCAACTCAACACATCACCACTATCTGGCGACAGAAGAGGCAGAAGAAAGCAATCAGAGCCAGGGAGGTTCCTTGGTGTCAGAAGACGTCCTTGGGGAAGATATGCTGCTGAAATCAGAGACCCTGCAACAAAAGAGAGACACTGGCTTGGCACTTTTGACACTGCCCATGAAGCTGCTCTTGCTTATGACCGAGCTGCTCTTTCCATGAAAGGTGGCCAAGCAAGAACCAACTTCATTTACTCCAACAATACTATTAATAATGCTTCTGAAAGCACCAACACCACTAATCTCCATCATCATCATCATCATCATGCTCTGTTACCTCCTGCAGAGTTCATCACAAACAGTACCAATCAGAAGATGATGAACAATGAAAATGGAGGAATTATGTCATTTGGGTCACCCCATGATGATAGTTTCTTCTTCTCCAGTAATGATTCCAATAATGGCAATAGTAACAACTCTGGCTATTTGGAATGCATAGTTCCTGATAACTGTTTCAGACCTGTTTCCAACAAGAGCATCAATAATAATGTGAGTGGTGGTTCGAGTGATGACCAAAATGTTGTCAGCCACATTAACACAAACACCTTGGAGGCCTTAAACATGCAAACAATGGCACCTAATAGCCACTATGCAGGATTCTATTCTTCTTCTTACCAGAGTACTGAACTACTTGATCATCAAGGATTCTGGGACAATAACAATGATGATCAGCAGCAATCATGGGATTATTGCATTGATTCAAGTGAGCTTTCAGCTATATTTAGCAGCAACAACAACAACAACAACAACACAGCAAGGGTGGTTGAAGATGATGATGATGGGAATAATAACAACATGATGGATGCAATGTGTCCTATATACAATACAGACAGTCCAAGCTATGGACTAATGATGGGTGCTCATCATCATCAGGCTATGTCTTCTTCAAGCTCTTATTGTTCTGCAGTTCCTGATTTTGGGGATGTTGACTTGGGATACTCACTCTTCTGA 1065 0.4131 MMNNTTTTTTTTTPSSSPYPPPLQLNTSPLSGDRRGRRKQSEPGRFLGVRRRPWGRYAAEIRDPATKERHWLGTFDTAHEAALAYDRAALSMKGGQARTNFIYSNNTINNASESTNTTNLHHHHHHHALLPPAEFITNSTNQKMMNNENGGIMSFGSPHDDSFFFSSNDSNNGNSNNSGYLECIVPDNCFRPVSNKSINNNVSGGSSDDQNVVSHINTNTLEALNMQTMAPNSHYAGFYSSSYQSTELLDHQGFWDNNNDDQQQSWDYCIDSSELSAIFSSNNNNNNNTARVVEDDDDGNNNNMMDAMCPIYNTDSPSYGLMMGAHHHQAMSSSSSYCSAVPDFGDVDLGYSLF* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0333 354 PRINTS Ethylene responsive element binding protein signature 46 57 IPR001471 GO:0003700|GO:0006355
Aev04g0333 354 PRINTS Ethylene responsive element binding protein signature 68 84 IPR001471 GO:0003700|GO:0006355
Aev04g0333 354 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 13 108 - -
Aev04g0333 354 Gene3D AP2/ERF domain 45 103 IPR036955 GO:0003700|GO:0006355
Aev04g0333 354 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF086 13 108 - -
Aev04g0333 354 SMART rav1_2 45 108 IPR001471 GO:0003700|GO:0006355
Aev04g0333 354 MobiDBLite consensus disorder prediction 1 47 - -
Aev04g0333 354 SUPERFAMILY DNA-binding domain 46 103 IPR016177 GO:0003677
Aev04g0333 354 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF086 110 354 - -
Aev04g0333 354 MobiDBLite consensus disorder prediction 32 46 - -
Aev04g0333 354 Pfam AP2 domain 48 94 IPR001471 GO:0003700|GO:0006355
Aev04g0333 354 CDD AP2 45 101 IPR001471 GO:0003700|GO:0006355
Aev04g0333 354 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 110 354 - -
Aev04g0333 354 ProSiteProfiles AP2/ERF domain profile. 45 102 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0333 Aev-Chr4 2094918 2095982 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0333 32 206 AP2-EREBP Transcription Factor Family AT5G18560 44.934 1.34e-53 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Aev04g0333 AP2 1e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0333 - - adu:107468049 251.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g2970 01 31457224 31458435 Aev04g0333 04 2094918 2095982 PCT