Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0293 ATGGAACCCTTCCCTTCACCACGACAACAACAGCCTCCTCCACCCGATAACATGGACGCCACAAACACCACCCTCGACGACCCTTCCTCAATCTGGGACCTTTCTTACCTCCTCGACTTCAACCTCGACGACCAAATCTCCTTCCCCGTTGACCTCACCGCCACCACCTCCTCCTCCCAACCACCTCCTCCGCCCTTCGATTTAGACCCTCCTGTTCCTCCTCAATCACAGGATACCATTCCTCCTCCTCCTCCTCCTCTTTCCGTCGATGATAGGGTTCGGAAGCGGGACCCGAGGCTCACGTGCTCCAACTTTCTCGCGGGCCGGGTCCCTTGTGCATGTCCCGAGATGGACGCTAAGCTCGAGGAGGAAGGGCTTCCTGGGAAGAAGCGCGTGAGGACCGTGGTGCGTGGGTCACCCGCGCGTTGCCAGGTGCCTGGGTGTGAGGCTGATATCAGCGAGTTGAAGGGGTACCATCGGAGGCATAGGGTTTGTTTGCGGTGTGCGAATGCTACCACCGTTATGCTCCATGGGGAGGCCAAGAGATACTGTCAACAGTGTGGCAAGTTTCACGTATTGTCGGATTTTGATGAAGGTAAACGCAGCTGCAGAAGAAAGTTAGAGCGACATAACAATAGGAGGCGAAGAAAGCCTTCAGATTCACAAGCTGCTGCTGATCATGAACCTGAACCTGTTAAGCAAAATGAGGATTCCAATAATGATGGAGAAGCCGGAAAAGATTGTTCAAATTTGAGTAGTGAAATAAATGAAAAAGAAGTGTCATTGGATCATGAAGACGAACCAGTTGCTATTCTGAGCACAGCTCCTGAGATGCAGAACATTACTAATGACAGTGTTATATCTTTTGTTGCTTCCGGTGAAACACAAGTGAATAGTGGAAAAGATGTTTCCAATATTTCTAATTCACCTTCGTATTGTGACAATAAGAGTGCCTATTCATCTTTGTGCCAAACAGGTCGGATCTCTTTCAAGCTTTATGATTGGAATCCTGCAGAATTTCCTAGAAGGCTGCGACACCAAATATTCCAATGGTTGGCAAGTATGCCGTTAGAGCTTGAGGGATATATCCGCCCAGGATGTACAATCCTGACTATTTTTATTGCAATGCCAAATAATATGTGGATAAATTTACTCGAAGACCCTATGCACTATGTCTGTGATCTTGTTGCTCCTAGAAAGTTGCTATCTGGAAGAGGCACTGCACTAGTTCGTCTTAATGACATGATATTCCATGTTATGAAAGATGGAACTTCTGTGGCGAAAGTCGAGGTAAACGTGCAGGCACCAAGGCTTCACTATGTTCACCCCACATACTTTGAGGCTGGGAAACCTATGGAGTTTGTTGCTTGTGGAAGTAACTTGCTACAGCGCAAGTTTCGGCTTCTTGTATCTTTTTCTGGAAAGTATCTGAAGTGTGAGTATTGTGTTCCAACTCCACATAACTGGACTGGAGACAGTATTTCTTGTGCTTTTGACAATCAGTTATACAAGATCTATGTCCCTCATATGGAGGAAAGTCTTTTTGGCCCTGCATTTATTGAGGTGGAGAACGAATCTGGTGTATCAAACTTCATTCCTGTACTTATTGGGGACAAAGAAATCTGCTCTGAGATGAAGACATTGCAGCAAAAATTAGATGCGTCTCCCCTTTCTAGACAGTTCCAGTCTACATTTGCTGGTTCTGTCTGCAGCTCATGTGAAGCTTTTGCACATAGACACACGTCATCGTCAGACTTGCTTGTAGATATAGCATGGTTGCTTAAGGACCCTACTTCGGAACATTTTGATAGAGTGATGTCGAGTTCACAAATTCAAAGATACTGTTATTTATTGGACTTCCTAATAAGCAATGATTCAATTATCATTTTGGAAAAAATATTACCAAGTTTGGTAATACTGACAGAAAGCATGAAATCAAGTATTGTGGTCAATATGGCTAGTGAGGTCGACTTGACACAACTACGGAATCACATCCATGGTGCTAGACATGTCATTTATCAGAAACGCCAGAATAACTTGCCGTCAGTTTCAGAAATGAAAAATCAGAATATTCTGTCCAGAGCAGATTCAAATGACAAAAATGATAGGATCCCACTTTTGAAGAGGGAGATTATAATGAATGTGGAAGATTTCCCTAAACAATCTTGCCGTCGATATCTCGGAAGGGGATTTTTCAGCTCTCGACCTGCAATATTCATGATTGTGTCAGTTGCCGTTTGTCTTGGGGTATGTGTAGCCTTTCTTCACCATGGGAAGGTTAGTGAGTTAGCTGTAACCATTAGAAGGTGCTTGTTTAACAATTCCTAG 2328 0.4459 MEPFPSPRQQQPPPPDNMDATNTTLDDPSSIWDLSYLLDFNLDDQISFPVDLTATTSSSQPPPPPFDLDPPVPPQSQDTIPPPPPPLSVDDRVRKRDPRLTCSNFLAGRVPCACPEMDAKLEEEGLPGKKRVRTVVRGSPARCQVPGCEADISELKGYHRRHRVCLRCANATTVMLHGEAKRYCQQCGKFHVLSDFDEGKRSCRRKLERHNNRRRRKPSDSQAAADHEPEPVKQNEDSNNDGEAGKDCSNLSSEINEKEVSLDHEDEPVAILSTAPEMQNITNDSVISFVASGETQVNSGKDVSNISNSPSYCDNKSAYSSLCQTGRISFKLYDWNPAEFPRRLRHQIFQWLASMPLELEGYIRPGCTILTIFIAMPNNMWINLLEDPMHYVCDLVAPRKLLSGRGTALVRLNDMIFHVMKDGTSVAKVEVNVQAPRLHYVHPTYFEAGKPMEFVACGSNLLQRKFRLLVSFSGKYLKCEYCVPTPHNWTGDSISCAFDNQLYKIYVPHMEESLFGPAFIEVENESGVSNFIPVLIGDKEICSEMKTLQQKLDASPLSRQFQSTFAGSVCSSCEAFAHRHTSSSDLLVDIAWLLKDPTSEHFDRVMSSSQIQRYCYLLDFLISNDSIIILEKILPSLVILTESMKSSIVVNMASEVDLTQLRNHIHGARHVIYQKRQNNLPSVSEMKNQNILSRADSNDKNDRIPLLKREIIMNVEDFPKQSCRRYLGRGFFSSRPAIFMIVSVAVCLGVCVAFLHHGKVSELAVTIRRCLFNNS* 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0293 775 MobiDBLite consensus disorder prediction 207 249 - -
Aev04g0293 775 MobiDBLite consensus disorder prediction 214 243 - -
Aev04g0293 775 SUPERFAMILY SBT domain 141 220 IPR036893 GO:0003677|GO:0005634
Aev04g0293 775 Gene3D - 139 204 IPR036893 GO:0003677|GO:0005634
Aev04g0293 775 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 28 772 IPR044817 GO:0003677
Aev04g0293 775 ProSiteProfiles Zinc finger SBP-type profile. 140 217 IPR004333 GO:0003677
Aev04g0293 775 MobiDBLite consensus disorder prediction 58 88 - -
Aev04g0293 775 MobiDBLite consensus disorder prediction 15 29 - -
Aev04g0293 775 Pfam SBP domain 143 217 IPR004333 GO:0003677
Aev04g0293 775 MobiDBLite consensus disorder prediction 52 92 - -
Aev04g0293 775 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 7 28 772 - -
Aev04g0293 775 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0293 Aev-Chr4 1784700 1791134 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0293 11 768 SBP-box Gene Family AT5G18830 47.566 0.0 672
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Aev04g0293 SBP 1.2e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0293 - - aprc:113863838 1089.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g0293 04 1784700 1791134 Aev04g0293 04 1784700 1791134 ECH