Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0275 ATGGGTTGTGTCCATGGCAAGTGTTGTAGCAGGTACCCTGCACCATCAGAGGGTGGCTCCAGGGACTGCAGAGAGCTTGGTCCTTACCGTGCACAAAGGAAGCACATGCTCACTCAGAGACCACTTGAGGTTGCTTCTGTCCCTTCACATAACTTCACTTTGGAGTATTCTGTTCTCACTCAGAGGGGATACTACCCTGATTCACCTGAGAAGGAGAACCAAGATAGTTTCTGCATTAGGACACAGATTCAAGGTAACCCCAGTGTCCATTTCTTTGGTGTGTATGATGGTCATGGTCAATTTGGTGGACAGTGCGCAAACTTTGTTAAGGATAGGTTGGTAGAGACATTGTCAAATGACCCTGCATTGTTGGATGACCCTGTCAAAGCCTACACTTCTGCATTCTTGACAACTAATTATGAATTGCATAATAGTGACATTGATGATTCGATGAGTGGTACTACTGCAATTACTGTGCTTGTTATTGGGGATACCCTTTATGTTGCTAATGTTGGTGATTCAAGAGCGGTGGTTGCTGTTAAGGATGGGAATAGGATTATTGCTGAGGACTTGTCCTCGGATCAGACACCGTTTCGGAGAGACGAATATGAGAGGGTGAAACTTTGTGGGGCAAGGGTGTTGAGTGTTGATCAGGTGGAAGGACTTAAGGATCCAAATATCCAGACTTGGGGCGATGAAGAGAGTCAGGGTGGCGACCCTCCGAGGCTGTGGGTTCAAAATGGGATGTATCCTGGTACTGCTTTTACAAGGAGTGTAGGGGATAATTTGGCAGAGACCATCGGTGTCATTGCTGTTCCAGAGGTCTCAACGGTTCAGCTTACGCCTAATCACCTTTTCTTTATTGTCGCAAGCGATGGCATATTTGAGTTCCTATCAAGCCAAACTGTTGTTGATATGGCAGCAAGCTATTCAGATCCCCGTGATGCATGTGCGGCCATTGCTGGAGAGTCATATAAACTCTGGTTGGAGCATGAGAACCGAACAGATGATATAACAATTATCATTGTTCAGATCAAAGGCCTGTCTAATTCAGGTTCATCTCGTGTCGGATCAGGTGAGATCAATGCCAGTACTATAACGAGGTCCAAGAGGGGAAATGGAATCTCTGAGATATCTGCTACCACTGGGTTAGATGTTTCCCGATCTATGAGGAGCGGTATGTCTGATCTACAGTCCTGTCAGCATGTGGTCTCAATGAGAAGTCCAGCTATAGTGGTCCCCTCACCAACAGTGATTGAAAAAAGGCTTTATGGAAGCATCACCAAGTCTCCATGCAATTTCTCCTAA 1308 0.4595 MGCVHGKCCSRYPAPSEGGSRDCRELGPYRAQRKHMLTQRPLEVASVPSHNFTLEYSVLTQRGYYPDSPEKENQDSFCIRTQIQGNPSVHFFGVYDGHGQFGGQCANFVKDRLVETLSNDPALLDDPVKAYTSAFLTTNYELHNSDIDDSMSGTTAITVLVIGDTLYVANVGDSRAVVAVKDGNRIIAEDLSSDQTPFRRDEYERVKLCGARVLSVDQVEGLKDPNIQTWGDEESQGGDPPRLWVQNGMYPGTAFTRSVGDNLAETIGVIAVPEVSTVQLTPNHLFFIVASDGIFEFLSSQTVVDMAASYSDPRDACAAIAGESYKLWLEHENRTDDITIIIVQIKGLSNSGSSRVGSGEINASTITRSKRGNGISEISATTGLDVSRSMRSGMSDLQSCQHVVSMRSPAIVVPSPTVIEKRLYGSITKSPCNFS* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0275 435 SMART PP2C_4 51 343 IPR001932 -
Aev04g0275 435 Pfam Protein phosphatase 2C 77 320 IPR001932 -
Aev04g0275 435 ProSiteProfiles PPM-type phosphatase domain profile. 55 345 IPR001932 -
Aev04g0275 435 Gene3D - 41 347 IPR036457 -
Aev04g0275 435 PANTHER PROTEIN PHOSPHATASE 2C AND CYCLIC NUCLEOTIDE-BINDING/KINASE DOMAIN-CONTAINING PROTEIN 24 417 - -
Aev04g0275 435 SUPERFAMILY PP2C-like 41 347 IPR036457 -
Aev04g0275 435 CDD PP2Cc 71 345 IPR001932 -
Aev04g0275 435 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 24 417 - -
Aev04g0275 435 ProSitePatterns PPM-type phosphatase domain signature. 91 99 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0275 Aev-Chr4 1695034 1697314 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0275 1 350 PP2C-type Phosphatase Gene Family AT3G06270 74.644 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0275 - - aprc:113872580 740.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g0275 04 1695034 1697314 Aev04g0275 04 1695034 1697314 ECH