Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0265 ATGATCGTGAAGGAGAACCCTGTAGGTACTGAACTGGCAATGAATAATGTGAATGTGGAGGAGGAAATAGATTTTTCCTGTGAACCATACTTGGGGTTGGAATTTGATTCAGCAGATGATGCACTTAAGTTTTACACATCATATGCTGCTCGAACGGGATTTAAAGTTCGGATTGGTCAGCTGTATCGATCAAGAACTGATGGGACGGTTTCTTCTCGAAGATTTGTGTGCTCGAAAGAGGGGTATCAGCTCAGTTCAAGAACAGGTTGTCCAGCATTCATAAGAGTGCAAATAAGCACGTCTGGAAAGTGGGTTGTTGATCATTTTCATAAGGTTCACAATCACGATCTTGAAACTGAAAGTGAAAATTGTGTGCCGGCATTGCAGCAGACTGGTGCTACATCTATCAATTCTGTTACCCAAGTGTCCCGCAGGCCAAGGAAGAAATTGCTTGGACAAGCCAATGGTGAATCCTCTAGCACCTTAGGCATTATTAATTTCAAGCGACTTCGAAAGGAAGAAATTGAAGGACAGTTCAGGACCGAACCGTTTGTTGGTCAAGAGTTCGGTTCACCCAATGAAGCCTACCAATATTATCATGCATATGCAGCATATGCGGGTTTTGGAGTTCGAATTGGTCAATTATTTCGTTCTAAGAATGATGGATCGATCACATCCCGCAGATTTGTGTGCTCAAAAGAGGGTTTCCAGCACCCTTCAAGGGTTGGTTGTGGGGCCTATATGAGGATTAAGAGACAGCCATCAGGAAAGTGGGTGGTGGACCGTCTCCATAAAGATCATAATCATGATTTCGACTCTGAAAACGAGGGTAGGGCAAAAAGTAATCCTGCTTCTAATGTTTTGACTGAGGAGGTTGATGCTGGATTGGTAAATGCGGAATTATTTCGGATAGATAACTACCATGTCGCTAGAGGAGCTAGGCAAAATCACATTAAAAGTGAATGGTACAGCATGCTTTTGGAGTATTTTCAATCAAGACAAGCTGAAGATACAGGATTCTTTTATGCTATGGAAGTCTATAGTGTTGATGAATTTGATGCCACATGGAATGCCCTCCTCAGCAAATATGGATTGAAGGATAATTCTTGGCTAAAGGAAATGTATGTGAAGCGTGCATCCTGGGTTCCATTATATTTAAGAGGCACGTTTTTTGCTGGCATACCCATTAACGAAAGTCTAGATTCATTCTTCGGTGCACTTTTAAATGGCCAAACACCTCTCATGGAGTTTATTCCACGGTATGAAAGAGGTCTTGAGCGACGCCGTGAGGAAGAAAGAAACGAGGACTTTAATACTTCTAATTTTCAACCCTTTTTGCAAACAAAAGAACCAGTTGAAGAACAATGTAGAAGCCTTTACACTCTTACCATATTCAAAATTTTTCAAAAAGAGCTTTTGCAGTGCTATAGTTATCTTGGGTTTAAAGTTTCTGTAGAAGGGAGCCTCAGCAGATATATGGTGCGTAGGTGTGGAAATGACATGGAGAAGTATTTAGTTACATTTAATGCATCTAACCTCAGCATTAGTTGTAGCTGTCAGATGTTTGAATATGAAGGTATTCTTTGTAGACATGCTCTGAGAGTGTTCCAGATTTTGGAATTAAGAGAGGTTCCTTCGCGCTACATCCTGCACCGATGGACCAGAAATGCTGAAGATGGTGTCTTTCCCGATATTGAATCATGGAGTAGTTCTCAGGAGCTCAGGAATTTGATGCTATGGAGTCTGAGAGAAACTGCATCTAAGTACATAGATGCTGGTGCAACATCTATTGAAAAGTTTAAACTTGCATATGAGATTTTGCGAGAGGGTGGGAGAAAGCTATGTTGGAACAGGTGA 1857 0.4136 MIVKENPVGTELAMNNVNVEEEIDFSCEPYLGLEFDSADDALKFYTSYAARTGFKVRIGQLYRSRTDGTVSSRRFVCSKEGYQLSSRTGCPAFIRVQISTSGKWVVDHFHKVHNHDLETESENCVPALQQTGATSINSVTQVSRRPRKKLLGQANGESSSTLGIINFKRLRKEEIEGQFRTEPFVGQEFGSPNEAYQYYHAYAAYAGFGVRIGQLFRSKNDGSITSRRFVCSKEGFQHPSRVGCGAYMRIKRQPSGKWVVDRLHKDHNHDFDSENEGRAKSNPASNVLTEEVDAGLVNAELFRIDNYHVARGARQNHIKSEWYSMLLEYFQSRQAEDTGFFYAMEVYSVDEFDATWNALLSKYGLKDNSWLKEMYVKRASWVPLYLRGTFFAGIPINESLDSFFGALLNGQTPLMEFIPRYERGLERRREEERNEDFNTSNFQPFLQTKEPVEEQCRSLYTLTIFKIFQKELLQCYSYLGFKVSVEGSLSRYMVRRCGNDMEKYLVTFNASNLSISCSCQMFEYEGILCRHALRVFQILELREVPSRYILHRWTRNAEDGVFPDIESWSSSQELRNLMLWSLRETASKYIDAGATSIEKFKLAYEILREGGRKLCWNR* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0265 618 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-RELATED 147 345 - -
Aev04g0265 618 SMART 26again6 515 542 IPR006564 GO:0008270
Aev04g0265 618 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 23 123 IPR031052 GO:0006355
Aev04g0265 618 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 147 345 IPR031052 GO:0006355
Aev04g0265 618 Pfam SWIM zinc finger 504 537 IPR007527 GO:0008270
Aev04g0265 618 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 349 614 IPR031052 GO:0006355
Aev04g0265 618 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-RELATED 349 614 - -
Aev04g0265 618 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-RELATED 23 123 - -
Aev04g0265 618 ProSiteProfiles Zinc finger SWIM-type profile. 504 540 IPR007527 GO:0008270
Aev04g0265 618 Pfam FAR1 DNA-binding domain 197 271 IPR004330 -
Aev04g0265 618 Pfam FAR1 DNA-binding domain 43 118 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0265 Aev-Chr4 1636760 1639042 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aev04g0265 FAR1 1.3e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0265 - - lang:109345299 570.852