Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0252 ATGTGCAATTTCAAAATTTCGGCAATTGAAACTCTTCTTTGTTGTTTCTTTAAGGTTGGCTTTTGGTCTGTGTTGTGTTGGTTTATATCATTGTGGTCAATTCTTGTCAAATTGTTAACAGTGACAATGGTGAGGGTTAGTGTCTTGAATGATGCTCTCAAGAGCATGTACAATGCCGAGAAGCGGGGGAAACGCCAAGTTATGATTAGGCCATCCTCAAAAGTGATTATCAAGTTCCTTTTGGTGATGCAAAAGCATGGGTACATTGGTGAGTTTGAGTATGTTGATGACCACAGGGCTGGAAAAATCGTGGTTGAATTGAACGGTAGACTGAACAAATGTGGGGTTATCAGTCCCCGTTTTGATGTTGGTGTCAAAGAGATAGAGGGTTGGACTGCTAGGCTGCTCCCTTCTAGACAGTTTGGTTATATTGTGTTGACTACCTCTGCTGGCATCATGGATCACGAGGAGGCAAGGAGAAAGAATGTTGGTGGTAAAGTGTTGGGTTTCTTCTACTAG 519 0.422 MCNFKISAIETLLCCFFKVGFWSVLCWFISLWSILVKLLTVTMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0252 172 Gene3D - 112 172 - -
Aev04g0252 172 SUPERFAMILY Ribosomal protein S8 46 172 IPR035987 GO:0003735|GO:0005840|GO:0006412
Aev04g0252 172 Gene3D - 43 111 - -
Aev04g0252 172 PANTHER 40S RIBOSOMAL PROTEIN S15A 43 172 IPR000630 GO:0003735|GO:0005840|GO:0006412
Aev04g0252 172 Pfam Ribosomal protein S8 49 172 IPR000630 GO:0003735|GO:0005840|GO:0006412
Aev04g0252 172 Hamap 30S ribosomal protein S8 [rpsH]. 44 172 IPR000630 GO:0003735|GO:0005840|GO:0006412
Aev04g0252 172 ProSitePatterns Ribosomal protein S8 signature. 142 159 IPR000630 GO:0003735|GO:0005840|GO:0006412
Aev04g0252 172 PANTHER BNAA02G06730D PROTEIN 43 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0252 Aev-Chr4 1557723 1558993 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0252 43 172 Cytoplasmic Ribosomal Protein Gene Family AT5G59850 97.692 1.67e-93 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0252 K02957 - thj:104809034 261.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g3016 01 31710857 31715508 Aev04g0252 04 1557723 1558993 PCT