Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0242 ATGATTAATACGATGTCGTCGTCATCATCATTAGGAGCAGTATGTGGGTGGAAACAGCAAGCAGAACAGCGGCTAGTAACAAGTAGTAGAGTCCCAATGGAGTCATTGGTGTTGCAGCAGTACCGGAAGGAGAAGGTGGTGGTCATACTGGGGGCCACTGGCACGGGCAAGACCAAGCTGGCCATAGACCTCGCCAACCACTTCCCGCCAGCAGAGATTGTCAACTCCGACAAAATGCAAGTCTACAAGGGCCTCGACATCACCACCAATAAGGTCACCGACGAAGAGTCTCGCGGGGTCCCACACCACCTCCTCGGCACTCTTGACCCTAATGCCCACTTCTCCGCCCTTGATTTCTGCCGTCAAGCTACCTCCGCCGTTGATTCCATCGTTGCCAGGGACGCTCTCCCCATCATCGCCGGTGGCTCCAATTCCTTCGTCGATGCTCTCGTCAACCATCACCCCAAGTTCAGACTAAGGTACGAGTGCTGTTTCCTCTGGGTGGATGTTTCGATCCCTGTTCTCCATTCCTCTCTGCGCACACGTGTGGATCGCATGATCGAAGCAGGGCAAGTGGAGGAGGTTCGCGAATTCTTCGACCCACTGGGCGATTACACAAAAGGGATACGAAGGGCCATTGGAGTTCCGGAATTCGACGAGTTTCTGAGAGCAGAGGCCGAAGGGGCGGACGAAGGGACAAAACAGAGGCTGTTGGCGATGGCCATTGCGAAGATCAAGGTCAACAACTGCACGCTCGCCAATCGCCAGCTCCAAAAAATTCAACGCCTGTACAACACGTGGAAGAGGAGCATGCACCGCCTCGACGCCACCGAGGTATTCTTGAAGAGTGGCTCTGCTTCTTCAAAAACAGAGGATGCTTGGCAGGAACACGTGCTCTCCAAGAGCCTCAGGATCCTCCACAGGTTCCTCTACGAGCAAGAGAGGAACAGTAGCAGTAATAACAACAAACATGTCGCTGTCTCTCCCAAAGATGTGATCGGTGCTGTTTCTTCGCCGGCGGTTGCAATGGCGGCAACACATTAG 1044 0.5402 MINTMSSSSSLGAVCGWKQQAEQRLVTSSRVPMESLVLQQYRKEKVVVILGATGTGKTKLAIDLANHFPPAEIVNSDKMQVYKGLDITTNKVTDEESRGVPHHLLGTLDPNAHFSALDFCRQATSAVDSIVARDALPIIAGGSNSFVDALVNHHPKFRLRYECCFLWVDVSIPVLHSSLRTRVDRMIEAGQVEEVREFFDPLGDYTKGIRRAIGVPEFDEFLRAEAEGADEGTKQRLLAMAIAKIKVNNCTLANRQLQKIQRLYNTWKRSMHRLDATEVFLKSGSASSKTEDAWQEHVLSKSLRILHRFLYEQERNSSSNNNKHVAVSPKDVIGAVSSPAVAMAATH* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0242 347 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 5, CHLOROPLASTIC 37 316 - -
Aev04g0242 347 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 173 IPR027417 -
Aev04g0242 347 Gene3D - 43 310 IPR027417 -
Aev04g0242 347 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 37 316 IPR039657 -
Aev04g0242 347 Pfam IPP transferase 158 258 - -
Aev04g0242 347 Pfam IPP transferase 80 154 - -
Aev04g0242 347 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 172 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0242 Aev-Chr4 1494846 1495977 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0242 160 310 C2H2 Transcription Factor Family AT2G27760 29.944 2.86e-17 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0242 K10760 - gmx:547754 429.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g0242 04 1494846 1495977 Aev04g0242 04 1494846 1495977 ECH
Aev01g3022 01 31749581 31750594 Aev04g0242 04 1494846 1495977 PCT