Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0234 ATGTCTCACATAGCTGTTGAGAGGAACAGGAGAAGACAGATGAATGAACATCTCAAAGTTCTAAGATCCTTGACCCCTTCTTTCTATATTAAAAGGGGGGATCAAGCATCTATTATAGGGGGAGTAATAGAGTTCATCAAAGAGCTGCACCAAGTGCTTCAATCTTTGGAGTCTCAGAAGAGAAGAAAGAGCCTGAGCCCTAGCCCAGGCCCAGGCCCAGGCCCAAGTCCAAGAACCCTGCAACCCAACTGCTTTCATGAACAACTTGACAACTCTAGTAATAGTGATTCGTCGTTCAAGGAGCTAGGAGCGAGTTGCAACTCTTCGGTTGCGGATGTTGAGGTGAAGATATCGGGTTCCAATGTGATTCTGAGAGTGATTTCACGCAAGATTGAGGGTCAAGTTGCAAAGATCGTAAGCCTTTTGGAAGCCCTTTCTTTTGAAGTCCTTCATCTCAACATCAGTACCATGGACGATACAGTTCTCTACCATTTTGTTGTTAAGATTGGACTGGAATGTGAACTTAGTCTGGAAGAACTAGCAGTGGAAGTACAGCATAGCTTCAGCGCTGACCCTATTATTACTGCACTCTGA 594 0.4478 MSHIAVERNRRRQMNEHLKVLRSLTPSFYIKRGDQASIIGGVIEFIKELHQVLQSLESQKRRKSLSPSPGPGPGPSPRTLQPNCFHEQLDNSSNSDSSFKELGASCNSSVADVEVKISGSNVILRVISRKIEGQVAKIVSLLEALSFEVLHLNISTMDDTVLYHFVVKIGLECELSLEELAVEVQHSFSADPIITAL* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0234 197 Gene3D - 1 64 IPR036638 GO:0046983
Aev04g0234 197 MobiDBLite consensus disorder prediction 57 97 - -
Aev04g0234 197 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 49 IPR011598 GO:0046983
Aev04g0234 197 MobiDBLite consensus disorder prediction 81 97 - -
Aev04g0234 197 CDD bHLH_AtFAMA_like 1 65 - -
Aev04g0234 197 PANTHER TRANSCRIPTION FACTOR MUTE 1 194 - -
Aev04g0234 197 Pfam Helix-loop-helix DNA-binding domain 2 49 IPR011598 GO:0046983
Aev04g0234 197 PANTHER TRANSCRIPTION FACTOR FAMA 1 194 IPR044283 GO:0003700|GO:0010052
Aev04g0234 197 SMART finulus 4 55 IPR011598 GO:0046983
Aev04g0234 197 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 1 68 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0234 Aev-Chr4 1420524 1422130 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0234 1 196 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06120 66.000 1.84e-85 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev04g0234 HLH 2.1e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0234 - - gmx:100810771 269.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g0234 04 1420524 1422130 Aev04g0234 04 1420524 1422130 ECH