Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0223 ATGTTCACGATGGAGCTTACATTGAAGGCATGGGCAAATGTAGAGGAGGATCACAGAAGGATACTTCAGAAGAAAGACCTTTTAGCTGCAATCAGAAAAACCGAGGTCTATGATTTTCTTCTTGATGTTTTCCCTAGGAATCAGACCATGGACCTTGTGGGTCCACCTCATCCCTTTGTGGCTCAAGTGGGTCCAAGACAAGAAGACCATTCTAAAGGTTCAGATGGTTGA 231 0.4416 MFTMELTLKAWANVEEDHRRILQKKDLLAAIRKTEVYDFLLDVFPRNQTMDLVGPPHPFVAQVGPRQEDHSKGSDG* 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0223 76 MobiDBLite consensus disorder prediction 55 76 - -
Aev04g0223 76 Gene3D Histone, subunit A 1 46 IPR009072 GO:0046982
Aev04g0223 76 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 54 - -
Aev04g0223 76 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-4 1 54 - -
Aev04g0223 76 SUPERFAMILY Histone-fold 1 46 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0223 Aev-Chr4 1360150 1360380 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0223 1 67 CCAAT-HAP5 Transcription Factor Family AT1G56170 42.500 1.33e-15 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0223 K08066 - gmx:100808341 72.0182