Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0215 ATGGTAAGAAAAAGGTTAGGTAATACGTTGATTCCATCAAAATCTGAAGCGTCTGAATCGGTTTTTCCCTGCATTTTCTGCTTCCTTCCCTCTTTCTCTTCTCTCCTTTTTAATTCTTTTCTTTCTCCTTTCACACACACACTCTCTTCATTTTTAGGGTTCTTTTCTTCTTTTTCTTCTTCACCAGAGAATCTTCTTCTTCATCATCATAAACCACTGGAGCTAACCATGGAAAATTTAACCTTGTCTTCATCATCTTCTTCTTCTTCATCGCACATTTCAGCTGCAGGTTTTGATGATTATTCCGAGGACTGCTGCAGCATATGTCTGGAACCTTTCGGCATCAATGACCCATCCACTATTACCAGTTGCAAACATGAATATCATTTGCAATGTATTCTTGAATGGTCACAGAGAAGCTCAGAGTGTCCGATTTGTTTGCAGTCGCTTTCTTTGGTTGACCCTTCCAGCCAAGAGCTTCTAGCTGCAATGGAGACTGAAAAGCGCTCAAGATCAAGAAATATGTATCCATCTTCATCTGCTAATTCCCGCTTCCCACTTGAAAGGGTTAATGTTGACTATGATGATTCTTGCTCAGATGACTCTGATATTGATGACCATATCATGCAACACCTAGCTGCTGCTACTAGTAGATCTCGGTTTGTCCATAGACGGGAAAGGATGAGGTCATCTGGAGCAGGTCCATCCGAGGTTCCTGTCTTTAACTCTCCTGTATATGTGTCCAGGGTGCAACCAACACTGACCACTTCACCTTCTGGTGGTAGTTCACCTATTTCTGTTGGTGAGGCTGCAAGAAACGCTACTCTTGAGAATGATTTTCCTTTCAAAACCAGAGTGCTCTATACCCAGCCACCATCGCCATCTGAGAGTGGAAGGAGACTGAATACTTCTGAGATGTTTTCTATCCCTGAGTCCATCAAATCCAAATTTTCTGCTGCTTCAGCCAGATATAAGGAATCTATATCAAAAAGTACCCGTGGCCTTAAAGAAAAGTTACTCGCTCACAATGCCTCAGTAAAAGAGCTGAGTAAAGGTGTCCAGCGCGAGATGAATGCAGGCATTGCTGGTGTTGCGCGGATGATCGAACGCCTTGAACTTACGTCAAAACGGCCTGGTTCTCCTCTCATTCCTGTCAGTCCTGAGGGATCTTCAGGCTTCCCTGCAAAAGGAAAGTCTGTTGAAGAGAACAGCATTGAGCATTCTCCAATTGAAAATGTGGTTCAAGATGTTACTCCCGATACTCCCTCACTCATTTCTAGCATGGTTGCTGGTCGAGTGGAAATTCGTCCACATGTTCAGAGTGAACATGATGCTGTGAGGACATAG 1347 0.4343 MVRKRLGNTLIPSKSEASESVFPCIFCFLPSFSSLLFNSFLSPFTHTLSSFLGFFSSFSSSPENLLLHHHKPLELTMENLTLSSSSSSSSSHISAAGFDDYSEDCCSICLEPFGINDPSTITSCKHEYHLQCILEWSQRSSECPICLQSLSLVDPSSQELLAAMETEKRSRSRNMYPSSSANSRFPLERVNVDYDDSCSDDSDIDDHIMQHLAAATSRSRFVHRRERMRSSGAGPSEVPVFNSPVYVSRVQPTLTTSPSGGSSPISVGEAARNATLENDFPFKTRVLYTQPPSPSESGRRLNTSEMFSIPESIKSKFSAASARYKESISKSTRGLKEKLLAHNASVKELSKGVQREMNAGIAGVARMIERLELTSKRPGSPLIPVSPEGSSGFPAKGKSVEENSIEHSPIENVVQDVTPDTPSLISSMVAGRVEIRPHVQSEHDAVRT* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0215 448 MobiDBLite consensus disorder prediction 406 421 - -
Aev04g0215 448 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 90 177 IPR013083 -
Aev04g0215 448 Pfam Ring finger domain 105 146 IPR001841 -
Aev04g0215 448 ProSiteProfiles Zinc finger RING-type profile. 106 146 IPR001841 -
Aev04g0215 448 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 81 431 - -
Aev04g0215 448 MobiDBLite consensus disorder prediction 379 421 - -
Aev04g0215 448 SUPERFAMILY RING/U-box 98 153 - -
Aev04g0215 448 SMART ring_2 106 146 IPR001841 -
Aev04g0215 448 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RHF1A 81 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0215 Aev-Chr4 1325452 1328380 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0215 79 154 C3H Transcription Factor Family AT4G00335 40.789 2.94e-14 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0215 K19043 - gmx:100785684 388.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g0215 04 1325452 1328380 Aev04g0215 04 1325452 1328380 ECH