Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0180 ATGAAGAAGGGTAAAACAGAGGAGAGCTATTATCTCAGAGCTTCACATCCAACTATGTCATCATCATCTGCTTCTTCTTCTTCTCTTATTAGCAGCGTTGTTGACAATAACAATAACAACCCTTCTTCAAGAGGTGCCACTATTGGCCACCACCATCATCAGATAAGCCTGAGATCAGCAATGGTTAGGCCTTATGTTCGATCCAAAATGCCTCGCCTTCGTTGGACACCAGATCTCCACCGTTGCTTCGTGCATGCAGTTCAAAGGCTTGGCGGAGAAGACAGGGCCACACCAAAGTTGGTGTTGCAATTAATGAATGTGAAGGGGCTTACCATATCTCATGTCAAAAGCCACCTTCAGATGTACAGGAGCATGAAGCACGAGCAGATGAGTGAAGCAGCGAAGAAGACTAGTAATATGGCATCCTCAACCTCTGAACCAGCAAGCTACGGTCAACAGAATATTAGTAATCTTCTGCAAGGAAGCTCTGCAACTCATTATACCCAAGACTTTGCTCGCACCAAACTCCAAGCTCAATGCAGGAATGATGATGAGGAGCAGGATTGTTCACACTATAATGCAAAGGGAAGGAGTGGTCAAACTATTACAGTTTGTAACGGCGGTGATGAACAGAAGACTCACACCTACATCATTTTCCAGGATATTCTCCAAGACAATAAAAAATGGGGCGAAAAGGGGGCAGTAGTAGCAGATGGCGGTGCAAGCTACAAAAGGGAGCATGGGGAGATGAGATTGGAAGAAGACATGGTGCTGTCCTCATCAAGGCCTTTTCATCCAATTTTCTCCAATCAGAGCCAACCCCGTCCACATCTCAATCATGTCTCTCTCAACCTTACGCTCTCTTAA 867 0.4533 MKKGKTEESYYLRASHPTMSSSSASSSSLISSVVDNNNNNPSSRGATIGHHHHQISLRSAMVRPYVRSKMPRLRWTPDLHRCFVHAVQRLGGEDRATPKLVLQLMNVKGLTISHVKSHLQMYRSMKHEQMSEAAKKTSNMASSTSEPASYGQQNISNLLQGSSATHYTQDFARTKLQAQCRNDDEEQDCSHYNAKGRSGQTITVCNGGDEQKTHTYIIFQDILQDNKKWGEKGAVVADGGASYKREHGEMRLEEDMVLSSSRPFHPIFSNQSQPRPHLNHVSLNLTLS* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0180 288 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 127 IPR017930 -
Aev04g0180 288 PANTHER MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN 31 221 - -
Aev04g0180 288 SUPERFAMILY Homeodomain-like 69 125 IPR009057 -
Aev04g0180 288 MobiDBLite consensus disorder prediction 13 49 - -
Aev04g0180 288 MobiDBLite consensus disorder prediction 1 53 - -
Aev04g0180 288 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 71 125 IPR006447 GO:0003677
Aev04g0180 288 Gene3D - 70 128 - -
Aev04g0180 288 Pfam Myb-like DNA-binding domain 73 123 IPR001005 -
Aev04g0180 288 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 31 221 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0180 Aev-Chr4 1094571 1096846 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0180 62 128 G2-like Transcription Factor Family AT2G42660 79.104 4.92e-32 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aev04g0180 Myb_DNA-binding 1.3e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0180 - - gmx:100795931 223.016