Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0152 ATGGAATTTTCGAAGGCAACCGCCAAAGTGAAGCAAAAGATGCGCAATAGTAGCTCCAGCAAGAAGAGAAAAGTTGAAGACAATCACTACTTGATCAACAATTCAGAAGAAGACGAAGAACAACCTTTTCTCACAAAGACTAAGTCAAGAAACAAAGCTAGAGGGATAATGCATCATAATATGGATACTGGACAACCTTCGCGAATCTGTCACCAGTGCTTGAGAAGGGATAGAATATCATATGTTCCTTGCATTAAATGTGAGAAAATGTATTGTTCGCGATGCATCAAGCAATGGTATTCCAATATGCCAGTGTCATATATGGCAGAGATGTGCCCTTTTTGCCGCAAAAACTGCAATTGCAATGTTTGCTTGCGTTCCAAGGGAATCATCAAGACGTCTAAGAGGGACATCACAGATAATGAAAAAGTTCAGCACATGCACTACATGGTTAACTTGCTCCTTCCATTTCTTAAACAAATTTGTGAAGAACAGAATGAAGAGCTAGAGATTGAAGCTAAAATACAAGGAAAACCATGTTCTCAGCTTGAGATACCACATATCCCTTGTGACTATGAACGTGTCTACTGTGACCATTGTGCTACTTCAATTGTTGATCTTCACCGAAGCTGCCCCAAGTGTTCCTTTGATGTCTGCCTTAGTTGCTGCAGAGAAATTCGCAATGGAAGCATCTCACCGCGGTCTGAAATGAAGTTCCCATACGTGAACAAGGGCTTATGTTATATGCACGGTGGTGATCCCCTGCCGGTGTCTTCTGATTTAGTGGCTCCAGAGGATCATAGCAAGGCATCTTCTGCCAAATGGAGTGCCAATAGAGATGGAAGTCTTCCTTGTGCTCCGGAAGGATTCGGAGGTTGTGGCCACTCTGTTCTGGAGTTAAAGTGCATGCTTAAACTAGGCTGGATATCTGACTTGGTAGCCAAAGCTCGTGACATTTTGGACAAGTACCGTCCATTGTCAGGTGACGTCTCCGAGGAAGGGATGCATCTCTTCCAAAAGATTTGGGCTAACGGTGAACCAATTATAGTTCATGACGTTCTTAAGCAAGGGTCAGGTTTGAGTTGGGAGCCAATGGTTACATGGAGGGCATTATCAGAAAATTCGGGTTCAAAGATCAGCTCAACTATGTCACAAGTGAAGGCTATTGATTGCTTGGCCAGTTGTGAGGTTGAAATTCTATCTCGTGGGTTCTTCAAAGGTTATACGGAGGGAAGAAAACATTTCAATCTCTGGCCAGAGATGCTCAAGCTCAAAGATTGGCCCCCATCAGACAAGTTTGAAGATCTCTTGCCACGCCACTGTGATGAGTTTATCCGTTGCTTACCATTACAAGAGTATACTGATCCTCGAGCTGGAGTTCTTAACCTTGCTGTGAAGCTGCCGGACCATGTCCTAAAGCCTGACATGGGTCCAAAAACGTATATTGCCTATGGGATTAGAGAAGAGCTTGGCAGAGGAGATTCTGTGACAAATCTTCATTGTGACATGTCAGATGCGGTGAACATTTTGACCCATACAGCAGAGGTGAAAATAACTGATGAACAACACATTGCCATCTCAAAGTTGAAAGAAGCACACAAGGCCCAAGATGAAAAAGAGCACCTTGGAGGATTTGGTCAAGACAACAAAGGGCAGGGAGAAAATGTGAATTGTCCTATCAATATATTTTCAAATGACATGTCTCCTATCTCTGAAGAAGGAAGGGACACGGGTGGTGGTGCTCTTTGGGACATATTTAGGAGAGAGGACACTGAAAAGTTGGGAGCATATCTAATAAAACACTCCAAAGAATTCAGGCATACTTATTGTAATCCAGTTGAACAGGTTGTGCATCCAATTCATGACCAGTGCTTTTATTTGACTCTGAAGCACAAGAAAAGGCTGAAGGAAGAATTTGGTGTAGAACCTTGGACTTTTGAGCAGAAACTTGGGGAGGCAGTATTCATTCCTGCTGGATGCCCACATCAAGTCAGGAATCTCAAGTCATGCACAAAAGTTGCTGCAGATTTTGTGTCCCCAGAAAATGTGCACATGTGCCTGCGTTTAGCTGATGAGTTCCGTCGGCTTCCTAAGAATCACAAGGCCAGAGAAGATAAGCTTGAGATAAAGAAGATGATAATCTATGCTGTGGACCAAGCTGTCAAAGATTTAGAAGCTTTAGGCTTTAGCTAG 2193 0.4318 MEFSKATAKVKQKMRNSSSSKKRKVEDNHYLINNSEEDEEQPFLTKTKSRNKARGIMHHNMDTGQPSRICHQCLRRDRISYVPCIKCEKMYCSRCIKQWYSNMPVSYMAEMCPFCRKNCNCNVCLRSKGIIKTSKRDITDNEKVQHMHYMVNLLLPFLKQICEEQNEELEIEAKIQGKPCSQLEIPHIPCDYERVYCDHCATSIVDLHRSCPKCSFDVCLSCCREIRNGSISPRSEMKFPYVNKGLCYMHGGDPLPVSSDLVAPEDHSKASSAKWSANRDGSLPCAPEGFGGCGHSVLELKCMLKLGWISDLVAKARDILDKYRPLSGDVSEEGMHLFQKIWANGEPIIVHDVLKQGSGLSWEPMVTWRALSENSGSKISSTMSQVKAIDCLASCEVEILSRGFFKGYTEGRKHFNLWPEMLKLKDWPPSDKFEDLLPRHCDEFIRCLPLQEYTDPRAGVLNLAVKLPDHVLKPDMGPKTYIAYGIREELGRGDSVTNLHCDMSDAVNILTHTAEVKITDEQHIAISKLKEAHKAQDEKEHLGGFGQDNKGQGENVNCPINIFSNDMSPISEEGRDTGGGALWDIFRREDTEKLGAYLIKHSKEFRHTYCNPVEQVVHPIHDQCFYLTLKHKKRLKEEFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAADFVSPENVHMCLRLADEFRRLPKNHKAREDKLEIKKMIIYAVDQAVKDLEALGFS* 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0152 730 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 5 727 IPR045109 GO:0032454|GO:0033169
Aev04g0152 730 SUPERFAMILY Clavaminate synthase-like 337 725 - -
Aev04g0152 730 ProSiteProfiles JmjC domain profile. 456 694 IPR003347 -
Aev04g0152 730 SMART cupin_9 437 694 IPR003347 -
Aev04g0152 730 Pfam JmjC domain, hydroxylase 581 677 IPR003347 -
Aev04g0152 730 PANTHER TRANSCRIPTION FACTOR JUMONJI (JMJC) DOMAIN PROTEIN 5 727 - -
Aev04g0152 730 Gene3D Cupin 321 703 - -
Aev04g0152 730 ProSiteProfiles Zinc finger RING-type profile. 70 116 IPR001841 -
Aev04g0152 730 MobiDBLite consensus disorder prediction 19 45 - -
Aev04g0152 730 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 68 135 IPR018866 -
Aev04g0152 730 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0152 Aev-Chr4 981605 985083 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Aev04g0152 JmjC 4.8e-14 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0152 K15601 K21989 gmx:100801772 1007.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g0152 04 981605 985083 Aev04g0152 04 981605 985083 ECH
Aev01g3076 01 32047720 32052305 Aev04g0152 04 981605 985083 PCT