Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0140 ATGAGTCAGCTCGGCTTGACGCAGAGGGACCCGCCACCACGCACTATCCTCGGTTTGTTGACGGAGCAAATGGACGCCGTTGATGGAGGACCGCCTCGCAGGAGGAGGCGCAGCTTCAAGGAACGCCTAGGATTCTTTGGGATGGGATGCTGTGGTGCCACGTGGCGATTCCGTTCCCAATCCATAACCGTCAGTAGGCACGAGGATCAAGAACAACACCAACAACCGCAACGGCTTCTTCTTGAAACGGATCCGGGTCGAGATCCAATTACTCTAGGACCCGAGTGCTTGGCTCCGACGCCGGTGAGCTCGGGTATGAACCTTGCGGCGGCGTTGGCGGCTGAGCGGCAGCTCCGGGGGCCGCAGGAGGTGGACGGAGGCGGCGGAGGCGGAGGAGGAGGGAGAGTGGGGAGGAGCAGTGCGCCGGGGACGCCGTGGAGGGTGTCGCTGATGAGGCTGCTGGAGGAGACGGACGGTGGCGATGCGGAGGTGGTTGCGGCGGCGGCGGAGGAGGAGGAAAAAGGAGGGGCGGGGAAGGAGGGGAATGATTCGGTGTGCTGCGTGTGCATGGGGAGGAAGAAAGGCGCGGCGTTCATACCATGTGGGCACACATTTTGCAGGGTGTGCTCAAGGGAGCTCTGGCTCAACCGAGGCTCCTGTCCCCTTTGCAATCGTTCAATCATCGAGATTCTCGACATCTTCTGA 705 0.6184 MSQLGLTQRDPPPRTILGLLTEQMDAVDGGPPRRRRRSFKERLGFFGMGCCGATWRFRSQSITVSRHEDQEQHQQPQRLLLETDPGRDPITLGPECLAPTPVSSGMNLAAALAAERQLRGPQEVDGGGGGGGGGRVGRSSAPGTPWRVSLMRLLEETDGGDAEVVAAAAEEEEKGGAGKEGNDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRSIIEILDIF* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0140 234 MobiDBLite consensus disorder prediction 66 98 - -
Aev04g0140 234 Pfam Zinc finger, C3HC4 type (RING finger) 183 229 - -
Aev04g0140 234 SUPERFAMILY RING/U-box 180 231 - -
Aev04g0140 234 ProSiteProfiles Zinc finger RING-type profile. 186 224 IPR001841 -
Aev04g0140 234 SMART ring_2 186 223 IPR001841 -
Aev04g0140 234 CDD RING-HC 186 223 - -
Aev04g0140 234 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 14 234 - -
Aev04g0140 234 PANTHER OS01G0917900 PROTEIN 14 234 - -
Aev04g0140 234 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 161 234 IPR013083 -
Aev04g0140 234 MobiDBLite consensus disorder prediction 120 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0140 Aev-Chr4 888078 888782 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0140 16 234 C3H Transcription Factor Family AT4G22250 49.351 1.50e-58 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0140 - - aip:107638663 286.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g0140 04 888078 888782 Aev04g0140 04 888078 888782 ECH
Aev01g3085 01 32117917 32118591 Aev04g0140 04 888078 888782 PCT