Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0104 ATGGTTTCGCTTGAGGAGTCTAGCTCTAACAACACGAACCGTTTTCCGTTGGGGCGGAGCTACCACTCCGTGTCGTCGATTTCCCCCAAAACGCACCGTCGTATTGGGAGGTCCATGCGCACCATACGCTCAAACTTCTTCCAAGACGACAATAGCAGCAGCTGCTGCTCCTTCACTGAGAAATCCACCTGTTTATCGGAAAACCTCTCCGACTCCGTCGTCGACCTTCGCCTCGGCGAGCTCGCCTCCCGCAACATCAACTCCGTCAGGCCTTCTTCCGCCGCCGCCGAGGAGGACCTCCTCGACCTCTCCCGCGCCTTCAGCGACTTCTCCGCTTGCAGCAGTGACATCTCCGGCGAGCTTCAGCGCCTCGCCTGTCTTCCGTCGCCGGAATATGTTCAGAAGAGCAATAACGACGCTGGAAACGCCACTGACAGTGCTGGCGCCGAGCAGGAACCTGAGCCGGAGCCTTGCGTAGGGTTCCTGCAGAGAGAGAATTTCTCCACGGAGATCATCGAGAGCATTTCGCCGGAGGATCTTCAGCCAACGGTGAAGCTCTGCATTGACGGACTCCAGTCGCCATCCATCGCCGTGAAGCGATCGGCCGCAGCGAAGCTCCGTCTTTTGGCAAAGAATCGCGCCGATAATAGAGTCCTAATCGCCGAGTCCGGTGCTGTTCCTGTTCTGGTTCCGCTGCTCCGGTGCAGTGATCCGTTGACGCAGGAGCACGCCGTGACGGCGTTGCTGAACCTGTCGCTCCACGAGGATAACAAGATGCTGATAACCAATGCTGGTGCCGTGAAATCACTGATCTACGCGCTGAAGACGGGGACGGAGACATCAAAGCAGAACGCGGCGTGCGCGCTGCTGAGCCTGGCGCTCGTGGAGGAGAACAAGACCTCGATCGGGGCCTCCGGCGCGATTCCGCCGCTGGTTTCGTTGCTGATCTGCGGTTCCAGCCGCGGGAAGAAGGACGCGCTGACGACGCTGTACAAGCTGTGCTCGGTGAAGCAGAACAAGGAGCGCGCAGTGAGCGCCGGAGCTGTGAGGCCGTTGGTTGAGCTTGTGGCGGAGCAGGGGACAGGCATGGCGGAGAAGGCGATGGTGGTGCTCAACAGCCTGGCGACGATTCAGGAAGGGAAGGACGCGATTGTGGAAGAAAATGGAATCGCTGCTCTCGTGGAAGCCATTGAAGACGGTTCAGTGAAGGGAAAGGAGTTTGCGGTTCTGACTCTTTTGCAGCTGTGTGGTGACAGTGCTAGGAACAGAGCGTTTCTTGTGAGGGAAGGTGGGATTCCTCCTCTTGTTGCACTTTCACAGACTGGCAGTGCTCGTGCTAAGCACAAGGCTGAAACACTCCTTCGATATCTGAGAGAATCAAGACAAGAAGCATCGTCTTCAAGTTCTTAA 1410 0.5759 MVSLEESSSNNTNRFPLGRSYHSVSSISPKTHRRIGRSMRTIRSNFFQDDNSSSCCSFTEKSTCLSENLSDSVVDLRLGELASRNINSVRPSSAAAEEDLLDLSRAFSDFSACSSDISGELQRLACLPSPEYVQKSNNDAGNATDSAGAEQEPEPEPCVGFLQRENFSTEIIESISPEDLQPTVKLCIDGLQSPSIAVKRSAAAKLRLLAKNRADNRVLIAESGAVPVLVPLLRCSDPLTQEHAVTALLNLSLHEDNKMLITNAGAVKSLIYALKTGTETSKQNAACALLSLALVEENKTSIGASGAIPPLVSLLICGSSRGKKDALTTLYKLCSVKQNKERAVSAGAVRPLVELVAEQGTGMAEKAMVVLNSLATIQEGKDAIVEENGIAALVEAIEDGSVKGKEFAVLTLLQLCGDSARNRAFLVREGGIPPLVALSQTGSARAKHKAETLLRYLRESRQEASSSSS* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0104 469 PANTHER U BOX DOMAIN-CONTAINING 5 466 - -
Aev04g0104 469 Pfam Armadillo/beta-catenin-like repeat 297 335 IPR000225 GO:0005515
Aev04g0104 469 Pfam Armadillo/beta-catenin-like repeat 215 252 IPR000225 GO:0005515
Aev04g0104 469 Gene3D - 168 324 IPR011989 -
Aev04g0104 469 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 347 389 IPR000225 GO:0005515
Aev04g0104 469 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 224 266 IPR000225 GO:0005515
Aev04g0104 469 SUPERFAMILY ARM repeat 181 458 IPR016024 -
Aev04g0104 469 MobiDBLite consensus disorder prediction 135 156 - -
Aev04g0104 469 Gene3D - 325 468 IPR011989 -
Aev04g0104 469 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 4-LIKE 5 466 - -
Aev04g0104 469 SMART arm_5 213 253 IPR000225 GO:0005515
Aev04g0104 469 SMART arm_5 377 417 IPR000225 GO:0005515
Aev04g0104 469 SMART arm_5 254 294 IPR000225 GO:0005515
Aev04g0104 469 SMART arm_5 295 335 IPR000225 GO:0005515
Aev04g0104 469 SMART arm_5 336 376 IPR000225 GO:0005515
Aev04g0104 469 SMART arm_5 418 459 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0104 Aev-Chr4 670576 672387 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0104 161 462 U-box Gene Family AT2G23140 47.419 7.58e-83 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0104 - - gmx:100806768 729.169
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g3111 01 32238966 32240391 Aev04g0104 04 670576 672387 PCT