Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0099 ATGCAAACATCTCAGAAACACTCAACCTCAGCCGGTATCGATTTATACCACCAGCCTGTGCAAGGCATTGATCCCTACAACCGTTACCAAATACTACAAAGCAATTCATGCCATCATGATAGTAGCAGCCAGGGAACCACTGTTTCATTCGAAACCTGCAAGGAGCAATACTTCACCCTTGAGTCTTCCCCAGCAACAAATCTCATAGGCTGTGATTCTCCTTCCTGTGCTAGTGTATCATCCAACAGGAGTCCTTTCTCTCCACAAGGCTCTCAATCATGCTATTCAGACCAGCACCAGTCATCTGATAACAACTATGGATCGCCGGTAAGTGGGTGCTCAAGTGCTGAAGATGGTTATGAATGGAAGCACAAACTTAAAGAATTGGAGACTTCGTTGTTGGGGCCTGAGTCAGATATTGGTGATAGTTGTCACTGCTGCTATAAGGGTGCTCATCAAGGAGCGGCTCCGATGTCTAAATACAATTGGGATCAGATTGCGGAAATGATTCCAAAATTGGACTTGAGAGAAGTCCTCATTCTGTGTGCACAAGCTGTGGCTGATGAGGACTATCCAACGGCGATAGGGTGGATGGATAACGTCCTGGTAAAGATGGTATCGGTTGCTGGGGATCCGATACAGAGGTTGGGTGCTTACATGTTGGAAGGTCTTAGAGCAAGGTTTGAATCATCAGGGAGCCTAATCTACAAGACGTTGAAGTGTGAACAACCAACAAGCAAAGATCTAATGACTTACATGCATGTCCTGTACCAGATTTGCCCATATTGGAAGTTCGCTTACATATCCGCAAATGTTGTCTTTGGAGAAGCAATGCAGAATGAACAAAGAATTCACATAATTGACTTCCAAATTGCACAAGGAACGCAGTGGATGCTGCTTATGCAGGCTCTTGCATCGAGACCTGGTGGACCTCCATTTGTTCGTGTCACCGGCGTCGATGACTCCCAATCGCATCATGCTAGGGGTGGAGGACTTCACATTGTGGGGAAAAGGCTATCAGATTATGCCAAAGCCTGCGGGGTGCCGTTTGAGTTCCACAGTGCTGCTATGTGTGGCTCTGAGGTTGAACTAGAGAATCTGGTAATTCAACCTGGGGAAGCTCTTGCTGTGAACTTCCCCTATGTTCTGCACCACATGCCGGATGAGAGTGTGAGCACAGAGAACCACAGAGACCGGCTTTTGAGGCTGGTGAAGAGCCTCTCACCTAAAGTTGTGACCCTTGTTGAGCAAGAATCCAACACCAACACCTCACCCTTTTTCCAAAGGTTTGTTGAGACCTTAAATTACTACACCGCCATGTTTGAATCGATAGACGTGGCTCGCCCCAGGGACGATAAGCAGAGGATCAGCGCAGAACAGCACTGCGTGGCTCGTGACATTGTCAACATGATAGCTTGCGAGGGTGCCGAGAGGGTGGAGAGGCACGAGCTTCTTGGTAAGTGGAGGTCGAGATTTTCGATGGCAGGGTTCGCACCTTGCCCCTTGAGTCCATCGGTTATGGCTGCGGTCAGAAGTCTCTTGAGTGAATTCAATGAGAATTATAGGGTTGAACAGATAGATGGTGCTCTCTATTTAGGATGGAAGAATAGAGCTTTGTCCACTTCATCTGCTTGGAGATGTTACTAG 1647 0.4754 MQTSQKHSTSAGIDLYHQPVQGIDPYNRYQILQSNSCHHDSSSQGTTVSFETCKEQYFTLESSPATNLIGCDSPSCASVSSNRSPFSPQGSQSCYSDQHQSSDNNYGSPVSGCSSAEDGYEWKHKLKELETSLLGPESDIGDSCHCCYKGAHQGAAPMSKYNWDQIAEMIPKLDLREVLILCAQAVADEDYPTAIGWMDNVLVKMVSVAGDPIQRLGAYMLEGLRARFESSGSLIYKTLKCEQPTSKDLMTYMHVLYQICPYWKFAYISANVVFGEAMQNEQRIHIIDFQIAQGTQWMLLMQALASRPGGPPFVRVTGVDDSQSHHARGGGLHIVGKRLSDYAKACGVPFEFHSAAMCGSEVELENLVIQPGEALAVNFPYVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQESNTNTSPFFQRFVETLNYYTAMFESIDVARPRDDKQRISAEQHCVARDIVNMIACEGAERVERHELLGKWRSRFSMAGFAPCPLSPSVMAAVRSLLSEFNENYRVEQIDGALYLGWKNRALSTSSAWRCY* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0099 548 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 20 545 - -
Aev04g0099 548 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 20 545 IPR005202 -
Aev04g0099 548 Pfam GRAS domain family 175 546 IPR005202 -
Aev04g0099 548 ProSiteProfiles GRAS family profile. 166 546 IPR005202 -
Aev04g0099 548 MobiDBLite consensus disorder prediction 82 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0099 Aev-Chr4 634793 636439 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0099 1 546 GRAS Transcription Factor Family AT4G17230 59.672 0.0 639
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aev04g0099 GRAS 3.7e-126 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0099 - - gmx:100819190 941.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g3116 01 32259479 32261068 Aev04g0099 04 634793 636439 PCT