Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0088 ATGAATTGCACACCTTCGAAAAACCTATGGATTCAGAGGCAACAATGCCCCTGTGGAGATTGGAAGTGTTACATTACATATGAGGGCGATGCTGAGGAAATTTCTGCAGCACCTGAATTGGTGAAGATTGAGAAAGCATCATCTGGTGCTATGATCACCCCTTATGTTGGAATGGTGTTCAATACTGATGATGAAGCTTTTGAGTATTATGGCAATTTTGCTAGGAAGAATGGTTTTTCTATTAGGAAAGAAAGATCTAGGATTAGCCCTCAATTGGGGACTTACAAGCGTGACTTTGTCTGTTACCGGTCCGGGTTTGCCCCAGTAAAGAAGAAGCCAAATGGAGAACACCATAGAGATAGGAAATCGGTGAGGTGCGGATGTGATGCAAAAATGTATCTGTCTAAGGAGGTGGTAGATGGGGCTTCCCAATGGTTTGTTGTGCAGTTTAGTAATGTACATAATCACGAGCTTTTGGAAGATGACCAAGTGCGCCTTCTTCCCGCGTACCGTAAAATTCATGAGGCTGATCAGGAGCGTATACTATTGCTTTCTAAAGCTGGGTTTCCGATACATCGGATAGTGAAGATGCTGGAGCTGGAAAAGGGGATTCAAGGTGGCCAACTGCCTTTCTTGGATAGGGATGTGAGGAACTTTGTTCAAAACCGTAAGAAGGTTGTTCAAGAGAATGAGGCATTGCTCAGTGAGAAGAGAGAAAATGATATATTGGAACTACTAGAGGCATGCAAAGCCATGAAAGAAACAGATGATGACTTTGTTTATGATTTTACAGTGGATGTGAATGATAAGGTTGACAATGTAGCCTGGTCATATGGTGACTCTGTTAATGCAAATTCGATGTTCGGTGATGTAGTTTATTTTGACACTACATATCGATCAATCACTTATGGATTGCTTTTCGGAGTATGGTTTGGAATTGATAGCTATGGTAGAACCATTTTTTTCGGCTGTGTATTATTGCAGGATGAAACACCCCAATCCTTCTCATGGGCATTGCAGACTTTTGTCCGACTTATGAGAGGAAGATGTCCACAAACAATTCTAACTGATCTTGACCCCGCGCTTAGGGATGCCATTAGAAGCGAATTTCCAAGCACTAAACATGTCATTCCTCTATGGAATATTCTATACAAGGCACCCAGTTGGTTTTCTCTTCCTCTTGGGCCTCGCTATGCAGAATTCAAAGCCGAATTCGATGCCTTATTTCACATTGAGAATACAGAGGAATTCGAACTTCGGTGGAGCCAAATGATTTCTGTGTTTGGACTTGGTTCAGATAAACACACAGATTTATTGTATGCTGTTCGAGCATCTTGGGCACAATCCTATGTAAGAGGTTTTTTTCTAGCTCGAATGGCAACAATAGCTTATTCGAAGTCTGTAGATGCCTTTCTGAAAGGGATCTTTGCTGTGCAGACATGTTTGCGTAGCTTTTTTGAGCAGGTTGGCATTTCTGCAAATTTTCAACATCAAGTGCGTCAAGAGACGCAATATATGCATCTTAAAACTTGCATACCCATTGAAGAGCATGCTCGGAGTGTTCTCACGCCTTTTGCCTTTAATGCTTTGCAGCAAGAGTTATTGCTGGCTATGCAATATGCTACATCTGAAATGGCAAATGGATCATTTATTGTGCGGCACTTCAAAAGGATGAATGGAGAAAGGCTTGTAATATGGATAGCTGAAGACGAACAGATTCACTGCTCCTGCAAGGAGTTTGAATCCTCTGGAATATTATGCAGACACGCACTTCGTGTATTCATCATAAAGAACTATTTTCAACTGCCTGAAAAATACTATTTAGGTAGATGGAGAAGGGAATGCTCTTTACTCGTCGATGATGATCATAGCAATCAAAGTATTGATGGGGAGTGGTGTCAAGAGTATCAGTCTCTAACTGAAACTCTGTTTTCAGAATCCTCACTTACAAGGGAGCGTTCTGACTACGTTCGAAGAGAACTGACGAAAGAACTCGCTCGGATCCTTAACGAGGTTAGGAATCTCCCTGACACTGATGGAATCTGCATGAACATGACTGTTTCACCAACCAGTTAG 2076 0.4181 MNCTPSKNLWIQRQQCPCGDWKCYITYEGDAEEISAAPELVKIEKASSGAMITPYVGMVFNTDDEAFEYYGNFARKNGFSIRKERSRISPQLGTYKRDFVCYRSGFAPVKKKPNGEHHRDRKSVRCGCDAKMYLSKEVVDGASQWFVVQFSNVHNHELLEDDQVRLLPAYRKIHEADQERILLLSKAGFPIHRIVKMLELEKGIQGGQLPFLDRDVRNFVQNRKKVVQENEALLSEKRENDILELLEACKAMKETDDDFVYDFTVDVNDKVDNVAWSYGDSVNANSMFGDVVYFDTTYRSITYGLLFGVWFGIDSYGRTIFFGCVLLQDETPQSFSWALQTFVRLMRGRCPQTILTDLDPALRDAIRSEFPSTKHVIPLWNILYKAPSWFSLPLGPRYAEFKAEFDALFHIENTEEFELRWSQMISVFGLGSDKHTDLLYAVRASWAQSYVRGFFLARMATIAYSKSVDAFLKGIFAVQTCLRSFFEQVGISANFQHQVRQETQYMHLKTCIPIEEHARSVLTPFAFNALQQELLLAMQYATSEMANGSFIVRHFKRMNGERLVIWIAEDEQIHCSCKEFESSGILCRHALRVFIIKNYFQLPEKYYLGRWRRECSLLVDDDHSNQSIDGEWCQEYQSLTETLFSESSLTRERSDYVRRELTKELARILNEVRNLPDTDGICMNMTVSPTS* 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0088 691 PANTHER FAR1-RELATED SEQUENCE 10 ISOFORM 1 27 681 - -
Aev04g0088 691 Pfam SWIM zinc finger 571 596 IPR007527 GO:0008270
Aev04g0088 691 SMART 26again6 573 600 IPR006564 GO:0008270
Aev04g0088 691 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 27 681 IPR031052 GO:0006355
Aev04g0088 691 Pfam FAR1 DNA-binding domain 68 159 IPR004330 -
Aev04g0088 691 ProSiteProfiles Zinc finger SWIM-type profile. 563 598 IPR007527 GO:0008270
Aev04g0088 691 Pfam MULE transposase domain 291 383 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0088 Aev-Chr4 570555 572815 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aev04g0088 MULE 3.1e-17 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0088 - - gmx:100817107 1248.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g0088 04 570555 572815 Aev04g0088 04 570555 572815 ECH