Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0079 ATGGCTGAATCGGATGACAACGAATCATCAGGAGGAGGAGGAGGGGGCCACACGGGCGGAATCAGCGAGCTGAGGGAGCAAGACAGGTTCCTGCCCATAGCGAACGTGAGCAGGATCATGAAGAAGGCGCTGCCGGGGAACGCCAAGATCTCGAAGGAGGCGAAGGAGACGGTGCAGGAGTGCGTGTCGGAGTTCATCAGCTTCGTCACAGGGGAGGCCTCCGACAAGTGCCAGAAGGAGAAGCGCAAGACCGTCAACGGCGACGATCTGCTGTGGGCCATGGCCACCCTGGGCTTCGAGGACTACGTCGACCCTCTCAAGCTCTATCTCCACAAGTACCGGGAGATGGAGGGCGAGAGGACCGCTTTAGTCGGAGGAGGAAGACCTGCTCCTGCTGAACAACAGAGGAGTACTGCAGATGGTGCTGTTTATGGTGGTCATGGTCATGGTCATGCCGTGCCATCACCTATGATGATGATGATGGGAGGCCACATCTATGGATCTTCTCCAACCAATCATAATACAAGGTAG 531 0.5687 MAESDDNESSGGGGGGHTGGISELREQDRFLPIANVSRIMKKALPGNAKISKEAKETVQECVSEFISFVTGEASDKCQKEKRKTVNGDDLLWAMATLGFEDYVDPLKLYLHKYREMEGERTALVGGGRPAPAEQQRSTADGAVYGGHGHGHAVPSPMMMMMGGHIYGSSPTNHNTR* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0079 176 MobiDBLite consensus disorder prediction 1 24 - -
Aev04g0079 176 Gene3D Histone, subunit A 20 142 IPR009072 GO:0046982
Aev04g0079 176 PRINTS CCAAT-binding transcription factor subunit A signature 77 95 - -
Aev04g0079 176 PRINTS CCAAT-binding transcription factor subunit A signature 58 76 - -
Aev04g0079 176 PRINTS CCAAT-binding transcription factor subunit A signature 96 114 - -
Aev04g0079 176 SUPERFAMILY Histone-fold 27 132 IPR009072 GO:0046982
Aev04g0079 176 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y PROTEIN 1 165 - -
Aev04g0079 176 ProSitePatterns NF-YB/HAP3 subunit signature. 61 77 IPR003956 GO:0005634|GO:0006355|GO:0043565
Aev04g0079 176 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 1 165 IPR027113 GO:0001228|GO:0006355|GO:0016602
Aev04g0079 176 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 30 94 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0079 Aev-Chr4 521678 522208 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0079 1 125 CCAAT-HAP3 Transcription Factor Family AT4G14540 76.000 5.12e-67 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Aev04g0079 CBFD_NFYB_HMF 7.5e-28 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0079 K08065 - gmx:100305641 223.016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev01g3134 01 32343919 32344446 Aev04g0079 04 521678 522208 PCT