Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0040 ATGATGTATCCGAGGCTCATACACCCTCATGAAGGGATTGTAGGTCAAGATGATGTTCAAGGTGGTGGTTCCAACCTCTCACACAAGGGTGACCCTTGTCTTGTTCTAACTGCTGATCCAAAACCAAGGCTTCGTTGGACCCAGGACCTCCATGAACGATTTGTTGATGCTGTTACCCAGCTTGGGGGTGCTAGCAAAGCTACTCCAAAAGCCATCATGCGGACCATGAATGTCAAGGGTTTGACTCTATTTCATTTGAAGAGTCATCTTCAGAAATACAGACTTGGTAAGCAATCGGGGAAAGATATGGGTGAGGGATGCAAAGATGGATTATCGGGTTCATACCTAGAAAGCCCCGGTACTGATAACTCTTCTCCGAAGTTGCCTACTTCTGATACAAACGAGGGTTATGAGATCAAGGAGGCATTAAGAGCACAGATGGAAGTGCAAAGTAAACTGCATCTGCAAGTAGAGGCAGAGAAGCACTTGCAGATTCGCCAGGATGCAGAGCAGAGATACATGGCCATGCTTGAAAGAGCTTGCAAGATGCTGGCTGATCAATTTATCGGCGCTTCAGTTATAGACACCGATAACCAAAAGTTTCAAGGGATTGGAAGCAAAGCACCAAGAGCTCCCTTGGTTGATCCTCTTGGCTTTTACACGATGCCATCTGCTGAGGTGACTGCAGTAAACGTACCGGAAGAAGAAGTACCACATAGTCTCCCGCCCCAAATGGCTGATTGCTCAACTGAAAGTTGTCTAACCTCACATGAGACTTCCGGAGGATTGGCTTTAGAAGGATCTCCAGGTGACGGGAAAAGGAGGATGCTTGGCATGGACTCTATGGCAGCACCTTTGATCTGGAGCGAAGCGAAGATGAGAACTCAAGCCATCAATGTAGCCCAAGGTAATAATCCTCATGGAATGACTAGGTATGGCATGTAG 945 0.4709 MMYPRLIHPHEGIVGQDDVQGGGSNLSHKGDPCLVLTADPKPRLRWTQDLHERFVDAVTQLGGASKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEGCKDGLSGSYLESPGTDNSSPKLPTSDTNEGYEIKEALRAQMEVQSKLHLQVEAEKHLQIRQDAEQRYMAMLERACKMLADQFIGASVIDTDNQKFQGIGSKAPRAPLVDPLGFYTMPSAEVTAVNVPEEEVPHSLPPQMADCSTESCLTSHETSGGLALEGSPGDGKRRMLGMDSMAAPLIWSEAKMRTQAINVAQGNNPHGMTRYGM* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0040 314 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 3 314 IPR044848 GO:0003700
Aev04g0040 314 Gene3D - 40 98 - -
Aev04g0040 314 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 3 314 - -
Aev04g0040 314 SUPERFAMILY Homeodomain-like 41 97 IPR009057 -
Aev04g0040 314 MobiDBLite consensus disorder prediction 116 132 - -
Aev04g0040 314 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 38 98 IPR017930 -
Aev04g0040 314 Pfam Myb-like DNA-binding domain 44 94 IPR001005 -
Aev04g0040 314 MobiDBLite consensus disorder prediction 98 133 - -
Aev04g0040 314 Pfam MYB-CC type transfactor, LHEQLE motif 138 183 IPR025756 -
Aev04g0040 314 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 41 96 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0040 Aev-Chr4 291332 296539 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0040 23 256 G2-like Transcription Factor Family AT3G24120 46.122 7.04e-64 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aev04g0040 Myb_DNA-binding 5.4e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0040 - - gmx:100786397 559.681