Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0039 ATGTATCATCCAAAGAACGTCCATAGTCCAAGTTTAATCGCAAGCAATTCATTAGTACATGGTGGCAACACAATGGATCCTGGCAATGGAGGAGACAATCATGCTAACAACCCTAATCTCACCTCAAAGCAACGTTTACGGTGGACACATGAGCTACATGAACGCTTTGTTGATGCTGTGGCACAACTTGGTGGGCCTGATCGTGCCACACCCAAAGGTGTCCTCAGAGTTATGGGTGTACAAGGCTTAACAATTTACCATGTGAAAAGCCATTTACAGAAATATCGACTAGCAAAGTACCTACCTGACTCTTCGTCTGATGAAGGGAAAAAAGCTGACAAGAAAGATACTGGAGATATGCTTTCCAATCTTGATGGTTCGCCTGGGATGCAGATTACTGAAGCACTAAAGCTTCAAATGGAGGTGCAGAAGCGCCTACATGAACAATTGGAGGTGCAGAGACAGCTACAATTAAGGATAGAAGCCCAGGGCAAGTACTTGAAAAAGATAATTGAAGAGCAACAGCGTCTCAGTGGGGTTCTTTCTGAGGCACCTGGCTCAGGGGCTACAGGCCCAGGTCCGGAAGACATTCGCCAGAAACCTGATAACGAGACTGATCCGGCAACTCCTGACCCTGAAAAAGCTGCCAAAGAGCGTGCCCCGGCAAAGAGTCTTTCAAATGAATCTTTTTCATCTCTCCACGAACCACTGACACCAGATTCTGGATGCCATGTTGGTTCCCCTGCTGACAGCCCCAAAGGGGAGAGATCATCCAAGAAGCAGCGAGTGAGTGCGGATGGAGCATATTCCAAACAAGACATGGTGCTTCCACATCAGATACTGGAGTCGAGCATGCCTTCATATCAGCAACCGAGCACTGTTTTCCTTACCCAAGACCAATTTGCTCCTTCATTAGGTCTGTCTGCTAGAAATGGTGAGGAATTGGATAAGGTTGGTGGCGGTAACATGTGA 972 0.4712 MYHPKNVHSPSLIASNSLVHGGNTMDPGNGGDNHANNPNLTSKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDSSSDEGKKADKKDTGDMLSNLDGSPGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEQQRLSGVLSEAPGSGATGPGPEDIRQKPDNETDPATPDPEKAAKERAPAKSLSNESFSSLHEPLTPDSGCHVGSPADSPKGERSSKKQRVSADGAYSKQDMVLPHQILESSMPSYQQPSTVFLTQDQFAPSLGLSARNGEELDKVGGGNM* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0039 323 MobiDBLite consensus disorder prediction 1 40 - -
Aev04g0039 323 MobiDBLite consensus disorder prediction 179 285 - -
Aev04g0039 323 SUPERFAMILY Homeodomain-like 41 97 IPR009057 -
Aev04g0039 323 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 42 100 IPR017930 -
Aev04g0039 323 Gene3D - 42 101 - -
Aev04g0039 323 MobiDBLite consensus disorder prediction 102 120 - -
Aev04g0039 323 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 5 315 IPR044848 GO:0003700
Aev04g0039 323 Pfam MYB-CC type transfactor, LHEQLE motif 130 176 IPR025756 -
Aev04g0039 323 Pfam Myb-like DNA-binding domain 46 96 IPR001005 -
Aev04g0039 323 MobiDBLite consensus disorder prediction 102 128 - -
Aev04g0039 323 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7 5 315 - -
Aev04g0039 323 MobiDBLite consensus disorder prediction 9 40 - -
Aev04g0039 323 MobiDBLite consensus disorder prediction 197 221 - -
Aev04g0039 323 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 43 98 IPR006447 GO:0003677
Aev04g0039 323 Coils Coil 133 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0039 Aev-Chr4 282450 284883 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0039 78 323 G2-like Transcription Factor Family AT2G01060 63.386 3.29e-89 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aev04g0039 Myb_DNA-binding 2.1e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0039 - - gmx:100786925 514.612