Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0022 ATGGGTCTCGGGAGAGCGGTTCCGGGTCCTCATGTTTTGGGATTCGGCGAGATGGGAGGCCTAAAGGCCCAAGAACAGAGAGAAGAGAAGAGAAGCATGAGTGAAAAGAATACGGTGTGCTCTTCTTCTACTTCTTCTCCCAACGATAAGGGCTTATCCCTCACTCCTAATCTCCCCATCACGATAGATGATGAATCTCCGGACAGTGAGCAACTACTTGGGGTTGAGGATGCGGGCAACGAGCTTGAGAATGACTGTGGTCCATTATTTGACATCGATGGAAGTGAGCATGATGGAAATGGGAGGGATGAAACAACAGTAGTAGTTAGTCATAGTGGAGAATCTCAAGATAAAGACTACCCTCCGCCAGTTACAGGTATGGAGTTTGACTCTTACGATGATGCCTACAACTATTATAATAGCTATGCCAAGGAAATTGGATTTGCTATTCGGGTTAAATCTTCGTGGACCAAACGTAATAGCAAAGAGAAGCGTGGTGCTGTGCTGTGCTGTAACTGTGAGGGCTTTAAAACAGTAAAAGAAGCAAATAGTCACAGGAAAGAAACAAGAACGGGCTGTTTAGCAATGATTAGGTTGAGATTAGTGGAATCTAACAGATGGAGGGTGGATGAAGTCAAGCTTGAGCATAACCATTCATTTGATCCTGAGAGAGCACAAAACTCTAAATCACATAAGAGGACAGAAATTGGGGCCAAGAGAAAACTTGAGCCAACTCTAGATGTCGAAGAATACGAGGCATTTCAGATGGCGTTGACTAGAGTGATATATGACACCAACACAGTAGATGAATTTGAAAGGGCTTGGAATGAGCTGACCCAGCATTTTGGAATAAGAAACCATGAAAAGCTCCGATCCTTGCATGAGGAACGTGAGCAATGGGCTCCGGTTTACACCAAGGACACTTTTTTTGCCGGAATTTCTGATTATCAAAACAGTGAGTCTGTGGTTCCCTTTTTTAAGGGTCATGTCCATCAACAAACTTCTTTGAAAGAATTTTTTCAGATCTATGAATTAGTTCTGCAAAATAAGAATAAAGCTGAAGCCATTGACGATTTTGACTCGCGAGATTCTAGCCCGTTACTGAAGACGAGATACTACTATGAGTTGCAGCTCTCTAAACTGTACACAAATGCAGTATTCAGGAAGTTCCAAGATGAGGTCGTGATGATGTCCTCTTGTCTCAGCATCACGCAGATTCAAACAAACGGGTCTGTAGCGACATACATGGCATTTAAAGAGTCATTGAATAAGATTCGCCTTGTAGCAGACAAGATTGATTGA 1302 0.4301 MGLGRAVPGPHVLGFGEMGGLKAQEQREEKRSMSEKNTVCSSSTSSPNDKGLSLTPNLPITIDDESPDSEQLLGVEDAGNELENDCGPLFDIDGSEHDGNGRDETTVVVSHSGESQDKDYPPPVTGMEFDSYDDAYNYYNSYAKEIGFAIRVKSSWTKRNSKEKRGAVLCCNCEGFKTVKEANSHRKETRTGCLAMIRLRLVESNRWRVDEVKLEHNHSFDPERAQNSKSHKRTEIGAKRKLEPTLDVEEYEAFQMALTRVIYDTNTVDEFERAWNELTQHFGIRNHEKLRSLHEEREQWAPVYTKDTFFAGISDYQNSESVVPFFKGHVHQQTSLKEFFQIYELVLQNKNKAEAIDDFDSRDSSPLLKTRYYYELQLSKLYTNAVFRKFQDEVVMMSSCLSITQIQTNGSVATYMAFKESLNKIRLVADKID* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0022 433 MobiDBLite consensus disorder prediction 1 67 - -
Aev04g0022 433 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 247 417 IPR031052 GO:0006355
Aev04g0022 433 PANTHER PROTEIN FAR1-RELATED SEQUENCE 8 64 249 - -
Aev04g0022 433 PANTHER PROTEIN FAR1-RELATED SEQUENCE 8 247 417 - -
Aev04g0022 433 Pfam FAR1 DNA-binding domain 137 221 IPR004330 -
Aev04g0022 433 MobiDBLite consensus disorder prediction 36 64 - -
Aev04g0022 433 MobiDBLite consensus disorder prediction 219 238 - -
Aev04g0022 433 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 64 249 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0022 Aev-Chr4 170945 174315 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aev04g0022 FAR1 5.4e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0022 K17604 - gmx:100796448 349.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g0022 04 170945 174315 Aev04g0022 04 170945 174315 ECH