Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0012 ATGGATGCCGCCGGTGCCGGAAGAGCACAACCAGGTGCTTACGCTGGAAGAGGACGTCAGCAACCACCGGAACCCAATCTCCAACCAGAATGGCGCCGTCCCTCAACGTCATCCTCATCCTCAAACCTCACTCTCCAACCCGAGTGGCGACGATCGACCGCTTCTTCTCACGCGCCTCCTCCGAATTCCAGCGCTGAAGAAGCGCGCGAGCTGCTTCTCCAACCAGAATGGCGGCGCTCGAAGCCACCGACAACAACAACAACAGCAGCAGCAGCAGCAGCACCTTCTTCTTCTGGTGGTTCGGAAGCGGAATGGAGGCTACCGAGGCCTACTTCTTCCTTCTGGAACCAAAACCAAAACCAAAGCCAAGGTTCTCGCAGAGCACAGGGTTCGAGTTCTAGTAGAGTTGGAGGAGGCAGCAGAGAAGATTCTAGAACTTGTGCTGATAATGCTGAGTCTTGGCGCCGACCTTCTTCTTCTGCGGATTCTCAAGTTCCCAAACTAGAAAGACTACAAATATCGAAACATTTAGCTACATCATCTTGCACCCTCGAAAGAAAGGATAAGCTTTCACCCATTCGGAGACCTGACAACGGTGGCACAATAGCAATTTTAACTAGCAGACTTCGTGTCAATCATTTCCCTGTTAAGTTCAACCCGGAGAGTATAATATTGCACTATAATGTCAGTGTGAAACCAAAGTTTTCCTCCAAGCATGGCCAGCCTCAGAAATTGTCCAAGTCTGATCTTTCCATGATTAGAGATAAACTGTTTTTGGATGATCCTGAGAGATTACCCTTGGATATGACTGCATATGATGGTGCAAAAAATATCTTTAGTGCTATACAATTACCAGAAGAAACCTTTACTGTGGAGATTTCTGAAGGAGAGGATGAGAAGGTCCTCACATACAGTGTTAGCTTAACACTTGTTAGTAGACTAAGGCTTCGCAAGCTAATGGACTATCTTAGCGGCCACAGCATCACAATTCCTAGGGATATTTTACAAGGGATGGATGTGGTAGTGAAAGAGAACCCAGTTAGGCACACTGTTGCAGTGGGGCGAAACTTCTATCCTACAAATCCTCCTTTGGCAATGAAGGATCTTCACCGCGGCATAATTGCCATTGGGGGGTTTCAGCACAGTTTAAAGCCTACATCTCAGGGTCTGTCCTTATGTGTAGACTACTCAGTGTTGGCTTTTCGAAAACAAATGTCAGTCTTGGATTTTTTGCATGAGCATATTGATAATTTTAGGTTGGATGAATTTGAATACTTCAGGAAATATGTTGAGGAGGCACTTATTGGATTGAAAGTTAGTGTGACTCATCGTAAATCCAAACAGAAATATACTGTTGTGAGATTAACGCCCGAGAATACAAGGTATGTCACTTTCCCCATTGACAATGCTGAGGGGTGGAATCTCTCAAAGAATGTTAGTCTTCTTAGCTTTTTTAGAGACAAATATGGCAAGGACATTGTATACAAAGATATCCCCTGTTTAGATTTAGGGAAAGGCAAAAAGAAGAACTATGTACCTATGGAATTCTGTGTTTTGGTTGCGGGCCAAAAATATCCCAAAGAGCATTTGGACGGGGTTTCTGCAAAGACATTGAAAGCACTGTCACTAGCTCACCCAAATGAGAGGGAGTGTGCAATACAAAAGATGGTGCAATCAAGTGATGGACCTTGCGGTGGTGGTGTTATTACAAATTTTGGAATGAGTGCGAGCACGACCATGACAACCATTCTAGGACGTGTCATTCGTCCCCCAGAATTAAGGTTAGGCGATCCAAACGGCAAGATTATCAAGATAGAAGTGGATCTAGAGAAATGTAACTGGAATCTTGTTGGGAGATCAATGGTAGAAGGCAAACCGGTTGAGTGTTGGGGCATTCTTGATTTCACCTGTTTTGGGTCATACAAGTACAAATTAAAAGAGAACGAATTCATTCAAAAGCTTATTGATAAATACAAGAAAATGGGTATAAACATGCAGGAGCCCATTTGGTATGAAGAATCTTCAATGAAGATACTTGCAAGTTATGATTCACTATCTGAATTACTTGAAAGAATCAGCAACACTTGTAAATATAAGCATGGTCAACTGCAATTTCTTCTGTGTGTAATGAGTAAGAAAAGTCCAGGTTACAAGTACCTCAAGTGGATTTCCGAGACCAAAGTTGGTATAGTTACTCAATGCTGCTTGTCTCACAGTGCTAATGAAGGGGATGACCTGTTTTATACTAATCTAGCCCTCAAGATCAATGCCAAGCTGGGAGGCAGTAATGTGGAGCTCAGTAATAGGCTCCCTTCCTTTGACGGTGAAGGACATGTTATGTTTGTTGGGGCTGATGTCAATCATCCTGGTTCACGGGACACCAAGAGTCCTTCAATTGCTGCCGTGGTTTCAACTGTTAATTGGCCTGCTGCGAATCGTTATGCAGCTCGTGTGTGCCACCAGTACAATCGGAGTGAGAAAATATTGAACTTTGGGGAGGTTTGTTCTGAGCTTGTTGCATGCTATAGGAGGATGAATGGAGTGAGGCCAGAAAAAATCATTGTTTTTCGTGATGGGGTGAGTGAGTACCAGTTTGACATGGTTCTTAATGAAGAGCTACTAGATTTGAAGCGAGAATTTCAGAGGCTAAATTACTTCCCAACAATCACTCTCATCGTAGCGCAAAAGCGACATCAAACTCGATTCTTTCCAGAAGGTTGGAGGGATGGATCTTCCAGTGGGAATATTCTACCAGGAACAGTTGTTGACACAAAAGTTACACACCCTTTTGAGTTTGATTTTTACCTTTGTAGTTACTATGGAAGCATAGGCACAAGCAAACCCACTCACTACCATGTGTTATGGGACGAACACAAGTTTACATCTGATGAATTGCAGAAGCTCATATATGAGATGTGCTTCACCTTTGCAAAGTGCACTAAACCTGTATCTTTAGTCCCTCCTGTGTACTATGCCGACCTTGCTGCTTATAGAGGACGGCTATACCACGAAGCAAAGATCGGGATGCAACCTCCAAAACCAGCAGCATCTTCATTTTCTAGGTTGTCTCCATCGGCCTCATCGACAGCTTCATTTGAGCCAGGATTTTACAGGTTGCATGCTGACCTGGAAAACATAATGTTCTTCATCTAA 3153 0.4377 MDAAGAGRAQPGAYAGRGRQQPPEPNLQPEWRRPSTSSSSSNLTLQPEWRRSTASSHAPPPNSSAEEARELLLQPEWRRSKPPTTTTTAAAAAAPSSSGGSEAEWRLPRPTSSFWNQNQNQSQGSRRAQGSSSSRVGGGSREDSRTCADNAESWRRPSSSADSQVPKLERLQISKHLATSSCTLERKDKLSPIRRPDNGGTIAILTSRLRVNHFPVKFNPESIILHYNVSVKPKFSSKHGQPQKLSKSDLSMIRDKLFLDDPERLPLDMTAYDGAKNIFSAIQLPEETFTVEISEGEDEKVLTYSVSLTLVSRLRLRKLMDYLSGHSITIPRDILQGMDVVVKENPVRHTVAVGRNFYPTNPPLAMKDLHRGIIAIGGFQHSLKPTSQGLSLCVDYSVLAFRKQMSVLDFLHEHIDNFRLDEFEYFRKYVEEALIGLKVSVTHRKSKQKYTVVRLTPENTRYVTFPIDNAEGWNLSKNVSLLSFFRDKYGKDIVYKDIPCLDLGKGKKKNYVPMEFCVLVAGQKYPKEHLDGVSAKTLKALSLAHPNERECAIQKMVQSSDGPCGGGVITNFGMSASTTMTTILGRVIRPPELRLGDPNGKIIKIEVDLEKCNWNLVGRSMVEGKPVECWGILDFTCFGSYKYKLKENEFIQKLIDKYKKMGINMQEPIWYEESSMKILASYDSLSELLERISNTCKYKHGQLQFLLCVMSKKSPGYKYLKWISETKVGIVTQCCLSHSANEGDDLFYTNLALKINAKLGGSNVELSNRLPSFDGEGHVMFVGADVNHPGSRDTKSPSIAAVVSTVNWPAANRYAARVCHQYNRSEKILNFGEVCSELVACYRRMNGVRPEKIIVFRDGVSEYQFDMVLNEELLDLKREFQRLNYFPTITLIVAQKRHQTRFFPEGWRDGSSSGNILPGTVVDTKVTHPFEFDFYLCSYYGSIGTSKPTHYHVLWDEHKFTSDELQKLIYEMCFTFAKCTKPVSLVPPVYYADLAAYRGRLYHEAKIGMQPPKPAASSFSRLSPSASSTASFEPGFYRLHADLENIMFFI* 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0012 1050 CDD Piwi_ago-like 568 1002 IPR045246 -
Aev04g0012 1050 MobiDBLite consensus disorder prediction 30 62 - -
Aev04g0012 1050 Pfam N-terminal domain of argonaute 208 342 IPR032474 -
Aev04g0012 1050 MobiDBLite consensus disorder prediction 79 95 - -
Aev04g0012 1050 PANTHER TRANSLATION INITIATION FACTOR 2C, PUTATIVE-RELATED 80 1049 - -
Aev04g0012 1050 MobiDBLite consensus disorder prediction 110 140 - -
Aev04g0012 1050 Gene3D paz domain 399 525 - -
Aev04g0012 1050 Gene3D - 587 768 - -
Aev04g0012 1050 ProSiteProfiles Piwi domain profile. 705 1004 IPR003165 GO:0003676
Aev04g0012 1050 MobiDBLite consensus disorder prediction 151 167 - -
Aev04g0012 1050 Gene3D - 775 1050 IPR036397 GO:0003676
Aev04g0012 1050 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 80 1049 - -
Aev04g0012 1050 CDD PAZ_argonaute_like 405 520 - -
Aev04g0012 1050 SUPERFAMILY Ribonuclease H-like 697 1004 IPR012337 -
Aev04g0012 1050 SMART PAZ_2_a_3 405 543 IPR003100 GO:0005515
Aev04g0012 1050 ProSiteProfiles PAZ domain profile. 405 521 IPR003100 GO:0005515
Aev04g0012 1050 Pfam Piwi domain 706 1000 IPR003165 GO:0003676
Aev04g0012 1050 SMART Piwi_a_2 705 1003 IPR003165 GO:0003676
Aev04g0012 1050 Pfam PAZ domain 425 533 IPR003100 GO:0005515
Aev04g0012 1050 Pfam Argonaute linker 1 domain 352 403 IPR014811 -
Aev04g0012 1050 SMART DUF1785_2 351 404 IPR014811 -
Aev04g0012 1050 MobiDBLite consensus disorder prediction 1 167 - -
Aev04g0012 1050 SUPERFAMILY PAZ domain 400 559 IPR036085 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0012 Aev-Chr4 98808 102884 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0012 209 1004 Eukaryotic Initiation Factors Gene Family AT1G48410 35.503 1.28e-140 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0012 K11593 - gmx:100783571 1550.03