Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0010 ATGATGGCTCATTCAGCTGAACCCTCATCATCTTTGAGCTTTACATCATCTTCCCTCTTATCAAATGGCGGCTCTGTTAACCACAACATATGCTCCTCTTATGGTTCTGATCCTGCTCTTAACCTTGAGGTTATAAGTTTGAGCAAGCTCAGCTCTAACTTGGAGCAGCTTTTGATAGACTCTGATTCTGATTATAGTGATGCCGATATCGTTGTGGAGGGAAATTCAGTTAGTGTTCACAGATGTGTTCTGGCATCTAGGAGCAAGTTCTTCCATGAATTGTTCAAGAGGGAGAAAGGGTCATCAGAGAAAGAAGGAAAATTGAAGTATTACATGAGTGATTTGTTGCCTTATGGCAATGTTGGATATGAAGCATTCCAAATTTTCCTGGGTTATGCATATACTGGTAAACTCAAACCTTCTCCTATGGAGGTTTCTACATGTGTTGACAATGTGTGTGCTCATGCTGCTTGTAGACCTGCGATTAACTTTGCCATCGAGTTGATGTATGCCTCTTCCATTTTTCAAATACCAGAGTTGGTATCACTTTTCCAGCGACGTCTTCTTAACTTTGTAGGGAAGGCGCTTGTGGAAGATATCATCCCAATCCTCATGGTTGGTTTCTATTGTAAATTGAGTCAACTTGTCACTCAATGTGTTGACAGGGTGGTACGCTCAAACCTTGACCAGATCTCAATTGAGAAGGAGCTTCCCCATGAGCTCTCGGAACAAGTTAAATTGCTCCGCCGCAACCAACAGCAAGATGTTGAAAATGATGATTCTGTAGTTGACCCTTTGCTTCTAAAACGGATAACTAGAATACACAAGGCATTAGACTCGGATGATGTTGAGCTCGTTAAACTTCTTTTAAATGAGTCGGACATTACTTTAGATAAAGCCAATGCTCTCCATTATGCTGCAGCCTACTGTGACCCCAAGGTTGTTTCTGAGGTACTTGGTTTGGGTCTAGCTGATGTCAATCTTCGCAATTCTCGGGGGTATACGGTGCTTCACATTGCTGCCATGCGTAAAGAGCCTTCCATTATAGTATCACTTCTATCGAAAGGGGCTTGTGCATCAGATTTGACTCTCGATGGCCAGAGCGCTGTTAGTATTTGCAGGAGGTTGACAAGGCCGAAGGATTATCATGCAAAAACAGAACAGGGGAAGGAAACTAACAAAGATAGGATATGCATCGATGTTCTTGAAAGAGAAATGCGGAGGAATCCACTGGCTGGGGATGCAGCTACATCTTCCCACACAATGGCTGACGATATCCACATGAAGCTACTATACCTTGAGAACAGAGTGGCATTTGCAAGACTATTCTTCCCTTCAGAAGCCAAACTAGCCATGGACATAGCACATGCTGAGACAACATCCGAGTTCGCTGGTCTTGCTGCATCAAAAGGTTCAAATGGAAACCTAAGGGAAGTTGATCTCAATGAGACTCCCTTAATGCAAGGCAAAAGACTCCATTCTAGGATGGAAGCCCTTATGAAAACTGTCGAGATGGGGCGGCGCTATTTCCCTCATTGCTCAGAAGTGCTAGATAAGTTCATGGAGGATGACCTACCTGACTTGTTTTACCTTGAGAAGGGAACCCAAGAAGAGCAGAGAATCAAGAGGATGAGGTTCATGGAGCTCAAAGATGATGTCCACAAGGCCTTCACAAAGGACAAGGCCGAGTTTAGCCGCTCTGGAATTTCATCTTCATCTTCTTCATCATCCCTCAGAGACAATGTACATTACAAGGCTAGAAAAGTGTGA 1770 0.4356 MMAHSAEPSSSLSFTSSSLLSNGGSVNHNICSSYGSDPALNLEVISLSKLSSNLEQLLIDSDSDYSDADIVVEGNSVSVHRCVLASRSKFFHELFKREKGSSEKEGKLKYYMSDLLPYGNVGYEAFQIFLGYAYTGKLKPSPMEVSTCVDNVCAHAACRPAINFAIELMYASSIFQIPELVSLFQRRLLNFVGKALVEDIIPILMVGFYCKLSQLVTQCVDRVVRSNLDQISIEKELPHELSEQVKLLRRNQQQDVENDDSVVDPLLLKRITRIHKALDSDDVELVKLLLNESDITLDKANALHYAAAYCDPKVVSEVLGLGLADVNLRNSRGYTVLHIAAMRKEPSIIVSLLSKGACASDLTLDGQSAVSICRRLTRPKDYHAKTEQGKETNKDRICIDVLEREMRRNPLAGDAATSSHTMADDIHMKLLYLENRVAFARLFFPSEAKLAMDIAHAETTSEFAGLAASKGSNGNLREVDLNETPLMQGKRLHSRMEALMKTVEMGRRYFPHCSEVLDKFMEDDLPDLFYLEKGTQEEQRIKRMRFMELKDDVHKAFTKDKAEFSRSGISSSSSSSSLRDNVHYKARKV* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0010 589 CDD BTB_POZ_NPR_plant 49 192 - -
Aev04g0010 589 Pfam Ankyrin repeats (3 copies) 275 357 IPR002110 GO:0005515
Aev04g0010 589 SUPERFAMILY POZ domain 52 190 IPR011333 -
Aev04g0010 589 MobiDBLite consensus disorder prediction 564 580 - -
Aev04g0010 589 MobiDBLite consensus disorder prediction 562 589 - -
Aev04g0010 589 ProSiteProfiles Ankyrin repeat region circular profile. 332 357 - -
Aev04g0010 589 ProSiteProfiles BTB domain profile. 66 142 IPR000210 GO:0005515
Aev04g0010 589 Gene3D Potassium Channel Kv1.1; Chain A 38 224 IPR011333 -
Aev04g0010 589 ProSiteProfiles Ankyrin repeat profile. 332 357 IPR002110 GO:0005515
Aev04g0010 589 SUPERFAMILY Ankyrin repeat 270 375 IPR036770 -
Aev04g0010 589 SMART ANK_2a 332 364 IPR002110 GO:0005515
Aev04g0010 589 SMART ANK_2a 269 297 IPR002110 GO:0005515
Aev04g0010 589 SMART ANK_2a 298 328 IPR002110 GO:0005515
Aev04g0010 589 Pfam BTB/POZ domain 63 149 IPR000210 GO:0005515
Aev04g0010 589 SMART BTB_4 66 192 IPR000210 GO:0005515
Aev04g0010 589 PANTHER REGULATORY PROTEIN NPR3 11 577 IPR044292 GO:0009862|GO:2000022|GO:2000031
Aev04g0010 589 PANTHER REGULATORY PROTEIN NPR3 11 577 - -
Aev04g0010 589 Pfam NPR1/NIM1 like defence protein C terminal 374 576 IPR021094 -
Aev04g0010 589 Gene3D - 267 406 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0010 Aev-Chr4 86224 89167 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Aev04g0010 NPR1_like_C 1.5e-96 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0010 K14508 - gmx:100217338 967.992