Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g3456 ATGCCGCCTCAGAGTCATGAGAGTCAGAGGCTCAGGCTCGCCACTGGCACAGTGCTGCTGCTGCTGTTGCTGCTTCTTCTTCCATGGGCAGACGCAGATCTGGCTTCCGAGCGAGCCGCATTGCTGTCTCTCCGCTCCTCAGTCGGTGGCCGCACTCTCTTCTGGAACGCCACCAACCAGAGCCCCTGCAACTGGGCCGGCGTCCAATGCGACCGCGGCCAAGTCGTCGAGCTTCACCTCCCCGCCGTCGCACTCTCCGGCCGCATTCCCACCGGAATATTCGGCAACCTCACCCACCTCCGCACCCTCAGCCTCCGATTCAACGCTCTCACTGGGCCCCTCCCCCCAGATCTCGCCTCCTGCACCGACCTCCGCAACCTGTACCTGCAGCGCAACCTCTTCTCCGGCGAAATCCCTCAGTTCCTCTTCGGCCTGCCCGACCTTGTTCGCCTCAACATGGGCTTCAACAACTTCTCCGGTGCCCTCCCTGCTGGCTTCAACAATTTGACCAGACTCCGTACTCTGTTCCTCGAAAATAACCAGCTCTCGGGTCCCATCCCGGAGTTGAACCTCCCCGACCTGGAGCAGTTCAACGTCTCTCAAAACTTGCTCAACGGCTCTGTCCCCAACAAGCTGCAGACTTTCCCTCAAGACTCCTTTCTGGGCAATTCGCTCTGTGGGCGTCCCCTTAGCCTCTGCCCTGGAGATGGAGCCACAGCTTCTCCCACCGGTGACAATGCAGGAACCAATGGGGGCAGGAAGAAGAAGAAGTTGTCTGGGGGTGCCATTGCTGGAATCGTTATCGGATCCGTTGTTTGTCTTCTGTTGGTTGTGTTTGCACTGATCCTGCTGTGCAGGAACAAGAGTGCCAAGAAGACCAGTGCCGTTGACGTTGCCACTGTCAAGCATCCCGAGGTGGAAGTTCCCGGTGACAAACCAGTCGGCGATGTGGAGAACGGGGCTCACAGTAATGGCGCTCACGATAATGGCTACACCGTGGCTGCCGCTGCCGCGGCGGCTATGGCAGCAGGGAACGGCAACAAGGCTGAGGCCAATGGTGGTGCAAGCGGCGGTGGAGCAAAAAAGTTGGTGTTTTTTGGTAATTCAGCGACCGCGGCGGCAAGGCCATTTGATCTGGAGGATTTGCTTAGAGCTTCGGCGGAGGTGTTGGGTAAAGGGACTTTCGGGACGGCCTATAAGGCGGTTCTGGAGGCAGGGCCTTTGGTAGCTGTGAAGAGGTTGAAGGATGTGACAATCTCTGAGAAGGAGTTCAAGGACAAGATTGAGGGTGTGGGAGCAATGGATCATCAGAATTTGGTCCCTCTAAGGGCCTTTTACTTCAGCAGAGATGAGAAGCTTCTTGTTTATGATTACATGTCTATGGGAAGCTTATCTGCTCTTTTGCATGGAAACAAAGGGGCAGGCAGGACACCATTGAATTGGGAAATCAGATCAGGAATTGCACTTGGAGCTGCTCGGGGAGTTGAGTACCTACATTTGCAGGGGCCCAATGTTTCTCATGGAAATATAAAGTCGTCTAATATCTTGTTAACCAAGTCCTATGACGCCAGAGTATCTGACTTTGGCCTGGCACACCTGGTTGGTCCCTCCTCTACCCCCAACCGTGTTGCCGGCTACCGTGCGCCTGAAGTCACTGATCCTCGCAAAGTATCTCAAAAGGCAGATGTGTACAGCTTTGGTGTGTTGCTGCTGGAACTTCTGACTGGGAAGGCACCCACACATGCTCTCTTAAATGAGGAAGGAGTTGACCTCCCTAGATGGGTGCAATCCGTTGTTAGAGAAGAGTGGACTTCTGAGGTCTTTGATCTTGAGCTCCTTAGGTACCAGAATGTTGAAGAGGAGATGGTTCAGTTGTTGCAACTTGCAGTTGATTGTGCAGCGCCATACCCCGATAAGCGCCCTTCAATGTCTGAAGTGGCACAGAACATTGAGGAGTTACGGCGGTCCAGCTTGAAAGAGGGTCAAGACCAGATTCAACAGCATGATCTGATCAATGATGTAGAGCTATAG 2031 0.5451 MPPQSHESQRLRLATGTVLLLLLLLLLPWADADLASERAALLSLRSSVGGRTLFWNATNQSPCNWAGVQCDRGQVVELHLPAVALSGRIPTGIFGNLTHLRTLSLRFNALTGPLPPDLASCTDLRNLYLQRNLFSGEIPQFLFGLPDLVRLNMGFNNFSGALPAGFNNLTRLRTLFLENNQLSGPIPELNLPDLEQFNVSQNLLNGSVPNKLQTFPQDSFLGNSLCGRPLSLCPGDGATASPTGDNAGTNGGRKKKKLSGGAIAGIVIGSVVCLLLVVFALILLCRNKSAKKTSAVDVATVKHPEVEVPGDKPVGDVENGAHSNGAHDNGYTVAAAAAAAMAAGNGNKAEANGGASGGGAKKLVFFGNSATAAARPFDLEDLLRASAEVLGKGTFGTAYKAVLEAGPLVAVKRLKDVTISEKEFKDKIEGVGAMDHQNLVPLRAFYFSRDEKLLVYDYMSMGSLSALLHGNKGAGRTPLNWEIRSGIALGAARGVEYLHLQGPNVSHGNIKSSNILLTKSYDARVSDFGLAHLVGPSSTPNRVAGYRAPEVTDPRKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSVVREEWTSEVFDLELLRYQNVEEEMVQLLQLAVDCAAPYPDKRPSMSEVAQNIEELRRSSLKEGQDQIQQHDLINDVEL* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g3456 676 Pfam Leucine rich repeat N-terminal domain 35 71 IPR013210 -
Aev03g3456 676 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 17 675 - -
Aev03g3456 676 ProSiteProfiles Protein kinase domain profile. 384 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev03g3456 676 SUPERFAMILY L domain-like 49 215 - -
Aev03g3456 676 Gene3D Transferase(Phosphotransferase) domain 1 459 675 - -
Aev03g3456 676 Gene3D Phosphorylase Kinase; domain 1 367 458 - -
Aev03g3456 676 Pfam Protein kinase domain 387 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev03g3456 676 PANTHER OS05G0588300 PROTEIN 17 675 - -
Aev03g3456 676 ProSitePatterns Protein kinases ATP-binding region signature. 390 412 IPR017441 GO:0005524
Aev03g3456 676 Pfam Leucine rich repeat 124 182 IPR001611 GO:0005515
Aev03g3456 676 SUPERFAMILY Protein kinase-like (PK-like) 388 649 IPR011009 -
Aev03g3456 676 CDD STKc_IRAK 390 653 - -
Aev03g3456 676 Gene3D Ribonuclease Inhibitor 190 236 IPR032675 -
Aev03g3456 676 Gene3D Ribonuclease Inhibitor 34 189 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g3456 Aev-Chr3 31873972 31876536 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g3456 33 669 Receptor kinase-like Gene Family AT1G48480 64.297 0.0 797
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aev03g3456 Pkinase 9.8e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g3456 - - gmx:100818955 970.689
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g3456 03 31873972 31876536 Aev05g3524 05 34442060 34444435 PCT