Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g3449 ATGGCTTCATCTTTTGATCTCATTGCAAATGTTAATGCTTCTAAGCTGAACTGGAATTTTAAAGTTTTTGTTGTGCGTCTATGGCGTGTTCCATCCCGCGATAACCCAGCTGACAGTGACTCCATTGAAATGGTCTTGCAGGATGACAAGGGAAGCAGAATTCATGCTTCAATCTCTCGAACTTTGATAAAGATTTATGGACCTGTCATTAAAGAGGCGAAAGTATACAATATGAGTAATTTCATTGTTGGTGTTAATAACATGAAGTTTAAGACAACAGGACATAAATTCAAGCTGAGTTTCTTGCATCGCAGTACTGTAATAGCCTTTGATGATAACACATTCCCAATGCGCTTTTTTAGAATGAAGAATATAGACACTTTAATCAATGATGATGGTGTGGATCAGAATATGCTTATAGATGTGATGGGTGAGATTGTTGGAAAAAATGATGCATCAATAGTTGCTGGACATGATGGCAAGGACATTAAAAGGATTGAAATCATTGTAGAAGATTTGAGGTTATTGAGTGGATCAACAGCTTCTTCTTCTAGGATAAGCATATTGTCTTCCCAGCCAAGTTTTTCAGTCAATGATGAGATTATTTCTGGTGTTGTTAGTATTGGTACTATAGAACAAGTTTTGAGTGCTACCAAGGAATGCTTCTTTTGGGTTATAGCTACAATTGTTTCATTGGAAGTAGATAACACTTCATGGACCTATAAAGCCTGCAAGAGATGTCCAAAGAAAGTTGAACAAGTTGAACGTGTTGGTAAAAAGTTTTATTGCAAAAAGTGTGACCGGTTTGAGTCTAATCCATATTTCAGGTTTCGATTACAAGTTATTATTACTGATGGTACTGGAAGCATGACTTTGGTTTTGTGGGATAGGGAATCAGTGCAACTCATAGGGAAAACAGCAAATGAAATAAAGCAAGATGATTCATCTCAGGGTGATACCTATCCTGATCTTTTAAATGATCTTCTTGAGATGAGGTTGCTGTTTAAAATTTCTGTGAAGCAAGGCAACATAAGCAATTTTGACAATGTGTATAATGTACTAAAGATATCTCAAGATGAGCAACTACTGTCCAAATATGGTTCACAGACTACATCATATGAAGGTGTAAACTCAAGTCCCATTACCAATTGTTTAACTAATCCTGACCAGGCAGCAAGCTGTAGCAGAGATGAAGTTAGTGAGTCTGAGACAAATTCTGATGAAAAAACTCCAGGAAAACGTGTGGTTGATGATTTATTAGCTCAAACATCCAATGCTGATAAAGATTATGCAGACTATCAACATTCAGCAAATAAGCCATCACGTGTTCCTTCAAAGAAGGAGAAACTTAGTTAA 1356 0.365 MASSFDLIANVNASKLNWNFKVFVVRLWRVPSRDNPADSDSIEMVLQDDKGSRIHASISRTLIKIYGPVIKEAKVYNMSNFIVGVNNMKFKTTGHKFKLSFLHRSTVIAFDDNTFPMRFFRMKNIDTLINDDGVDQNMLIDVMGEIVGKNDASIVAGHDGKDIKRIEIIVEDLRLLSGSTASSSRISILSSQPSFSVNDEIISGVVSIGTIEQVLSATKECFFWVIATIVSLEVDNTSWTYKACKRCPKKVEQVERVGKKFYCKKCDRFESNPYFRFRLQVIITDGTGSMTLVLWDRESVQLIGKTANEIKQDDSSQGDTYPDLLNDLLEMRLLFKISVKQGNISNFDNVYNVLKISQDEQLLSKYGSQTTSYEGVNSSPITNCLTNPDQAASCSRDEVSESETNSDEKTPGKRVVDDLLAQTSNADKDYADYQHSANKPSRVPSKKEKLS* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g3449 451 MobiDBLite consensus disorder prediction 400 415 - -
Aev03g3449 451 PANTHER BNAC07G49340D PROTEIN 27 151 - -
Aev03g3449 451 SUPERFAMILY Nucleic acid-binding proteins 212 357 IPR012340 -
Aev03g3449 451 CDD RPA1_DBD_C 219 356 IPR013955 -
Aev03g3449 451 PANTHER REPLICATION FACTOR A 1, RFA1 177 374 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Aev03g3449 451 PANTHER REPLICATION FACTOR A 1, RFA1 27 151 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Aev03g3449 451 SUPERFAMILY Nucleic acid-binding proteins 4 112 IPR012340 -
Aev03g3449 451 CDD RPA1_DBD_A_like 21 107 - -
Aev03g3449 451 MobiDBLite consensus disorder prediction 388 451 - -
Aev03g3449 451 Pfam Replication factor-A C terminal domain 222 348 IPR013955 -
Aev03g3449 451 PANTHER BNAC07G49340D PROTEIN 177 374 - -
Aev03g3449 451 Pfam Domain of unknown function DUF223 43 139 IPR003871 -
Aev03g3449 451 Gene3D - 5 109 IPR012340 -
Aev03g3449 451 Gene3D - 203 366 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g3449 Aev-Chr3 31820841 31823419 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g3449 215 341 Core DNA Replication Machinery Family AT5G08020 31.008 4.06e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g3449 - - aip:107633426 242.662