Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g3443 ATGAGTGAGTGGCGAACATGCAGCATGCCATTGATTGATTGTCTGATCGGATGTGTCGCTCCTCCATCCATCTCTTGTGTTCATTCTACCAAAACCATCAAACAACCGACGCAATTATTATTTTATAATAATAATAATCTATCATTATTCTGGGTTCATATCAAGCGTGGCGTCAACCTCGCCGTTCGTGATGTCAATACTAGCGACCCTTACATCGTCGTGCGCATGGGCAAACAGAAACTGAAGACTCGGGTGATAAAAAAGGATGTAAATCCTGTGTGGGATGAGGACCTCACACTGTCTGTTATGGATCCGATTGAGGGATTCGTACTGACAGTGTATGACCACGACACATTCAGCAAAGACGACAAGATGGGGGATGCAGAGTGCGACCTGAGACCATTCATAGAAGCGCTGAAGACGACGGCCAGCACAGAGGCGCTGCCATGTGGGACGGTGATCAGCAGAGTGCAGCCCTGCAGGACTAACTCCCTCGCTGAGGAGAGCTGCATCACCTGGAATACTGACGGCAACGTTGTCCAAGACCTCGTCCTTCGACTCTCCAATGTCGAATCCGGTGAAGTCGAACTCCAGTTGCAATGGATCGATCTTCCTGGTGCCAAGGGTTTACTCTCTCGTTGA 642 0.4907 MSEWRTCSMPLIDCLIGCVAPPSISCVHSTKTIKQPTQLLFYNNNNLSLFWVHIKRGVNLAVRDVNTSDPYIVVRMGKQKLKTRVIKKDVNPVWDEDLTLSVMDPIEGFVLTVYDHDTFSKDDKMGDAECDLRPFIEALKTTASTEALPCGTVISRVQPCRTNSLAEESCITWNTDGNVVQDLVLRLSNVESGEVELQLQWIDLPGAKGLLSR* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g3443 213 ProSiteProfiles C2 domain profile. 32 145 IPR000008 -
Aev03g3443 213 SMART C2_3c 49 144 IPR000008 -
Aev03g3443 213 Pfam C2 domain 52 134 IPR000008 -
Aev03g3443 213 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4-LIKE 38 209 - -
Aev03g3443 213 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 49 204 IPR035892 -
Aev03g3443 213 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 38 209 IPR044562 -
Aev03g3443 213 Gene3D C2 domain 43 209 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g3443 Aev-Chr3 31798338 31799338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g3443 80 210 C2H2 Transcription Factor Family AT1G70790 58.015 5.53e-48 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g3443 - - gmx:100799469 246.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g3443 03 31798338 31799338 Aev03g3443 03 31798338 31799338 ECH