Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g3420 ATGGATATCGAAGAAGACATCCGTTCTTTACAGCTTGACTCGGCAGAAGACAATAATGGGGTGGTAAATCCAGAGGATGAAAAGCCAGAAGAAGTTGATAAACATGAAATGATTGAAGAAGTTGATAAATCTGAAAAGATGGAAGAAGTTGATAAATCTGAAAAGATAGAAGAAGTTGAGAAATCTGATAAGATGGAAGAAGTGAAAGAAAAAGAAATTTATTCTGTGGAAGAAGAAGAGCTGGAGTCAAAAAAAAGACACTTGAATGTTGTCTTCATTGGCCATGTTGATGCTGGTAAGTCTACAACTGGAGGCCAGATACTTTTCCTCAGTGGTCAGGTTGATGATAGGACTATACAAAAATATGAGAAAGAAGCTAAAGACAAGAGTCGAGAAAGCTGGTACATGGCTTATATAATGGACACAAATGAAGAGGAGAGGGTGAAGGGAAAAACAGTTGAAGTTGGAAGGGCACATTTTGAGACGGAGACAACAAGGTTTACAATTTTGGATGCACCTGGTCACAAAAGCTATGTTCCTAACATGATCAGTGGTGCATCTCAAGCAGATATTGGAGTGTTGGTAATTTCTGCTCGAAAGGGAGAATTTGAAACTGGATATGAGAGGGGTGGACAAACTCGTGAGCATGTCCAGCTTGCAAAAACGCTTGGTGTGGCTAAGTTGCTTGTTGTTGTGAATAAAATGGATGACCCAACTGTGAATTGGTCAAAAGATAGGTATGATGAAATTGAGTCAAAAATGATTCCGTTTCTGAAGCAATCAGGATACAATGTCAAGAAAGATGTCCTTTTTTTACCAATATCTGGGCTGATCGGTACCAACATAAAAACAAGAGTTGATAAAAGTAGTTGTTCATGGTGGGATGGTCCCTGCTTATTTGAAGCACTTGATGCGGTTGAAGTTCCTCTACGAGATCCCAAAGGTCCTTTCAGGATGCCTATACTTGATAAATTCAAAGACATGGGAACTGTTGTTATGGGAAAAGTGGAATGTGGTACTGTTCGTGAGGGAGATTCCTTGTTGGTCATGCCAAATAAGGATCAAGTCAAAGTTGTTGGCATTTATATAGATGAAGATCGGGTTAAACGTGCTGGGCCTGGTGAAAATTTACGGGTCAGAATATCTGGTGTTGAAGAAGACGACATATCATCTGGGTTTGTCCTGTCTAGTGTTGCAAAGCCAATATCAGCTGTTACTGAGTTTGTTGCTCAGATGCAAATCCTTGAATTGTTGGACAATGCTATTTTTACTGCTGGGTACAAGGCTGTTCTGCATATCCACTCTGTAGTTGAAGAATGTGAGATTGTTGAGCTGTTACAGCAAATTGATCCGAAGACAAAGAAACCAATGAAAAAGAGAGTTCTCTTTGTGAAGAATGGTGCTGTTGTTGTGTGCCGTGTTCAGGTTAGTAGCTCGATATGCGTTGAGAAGTTCTCTGATTTTCCTCAACTTGGGAGATTCACTCTTCGTACTGAAGGAAAAACAGTAGCTGTGGGAAAAGTCACTGGTGTGTAA 1536 0.4004 MDIEEDIRSLQLDSAEDNNGVVNPEDEKPEEVDKHEMIEEVDKSEKMEEVDKSEKIEEVEKSDKMEEVKEKEIYSVEEEELESKKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERVKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQTREHVQLAKTLGVAKLLVVVNKMDDPTVNWSKDRYDEIESKMIPFLKQSGYNVKKDVLFLPISGLIGTNIKTRVDKSSCSWWDGPCLFEALDAVEVPLRDPKGPFRMPILDKFKDMGTVVMGKVECGTVREGDSLLVMPNKDQVKVVGIYIDEDRVKRAGPGENLRVRISGVEEDDISSGFVLSSVAKPISAVTEFVAQMQILELLDNAIFTAGYKAVLHIHSVVEECEIVELLQQIDPKTKKPMKKRVLFVKNGAVVVCRVQVSSSICVEKFSDFPQLGRFTLRTEGKTVAVGKVTGV* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g3420 511 Pfam Elongation factor Tu GTP binding domain 85 298 IPR000795 GO:0003924|GO:0005525
Aev03g3420 511 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 141 156 IPR031157 -
Aev03g3420 511 CDD eRF3_C_III 403 509 - -
Aev03g3420 511 Pfam Elongation factor Tu C-terminal domain 401 511 IPR004160 -
Aev03g3420 511 Pfam Elongation factor Tu domain 2 329 395 IPR004161 GO:0005525
Aev03g3420 511 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 69 320 IPR027417 -
Aev03g3420 511 SUPERFAMILY Translation proteins 308 401 IPR009000 -
Aev03g3420 511 Gene3D - 61 309 IPR027417 -
Aev03g3420 511 MobiDBLite consensus disorder prediction 21 63 - -
Aev03g3420 511 PRINTS GTP-binding elongation factor signature 168 178 IPR000795 GO:0003924|GO:0005525
Aev03g3420 511 PRINTS GTP-binding elongation factor signature 228 237 IPR000795 GO:0003924|GO:0005525
Aev03g3420 511 PRINTS GTP-binding elongation factor signature 89 102 IPR000795 GO:0003924|GO:0005525
Aev03g3420 511 PRINTS GTP-binding elongation factor signature 184 195 IPR000795 GO:0003924|GO:0005525
Aev03g3420 511 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 85 314 IPR000795 GO:0003924|GO:0005525
Aev03g3420 511 CDD EF1_alpha 89 309 - -
Aev03g3420 511 Gene3D Translation factors 314 399 - -
Aev03g3420 511 PANTHER TRANSLATION FACTOR 2 505 - -
Aev03g3420 511 PANTHER BNAA06G12300D PROTEIN 2 505 - -
Aev03g3420 511 CDD eRF3_II 316 397 - -
Aev03g3420 511 MobiDBLite consensus disorder prediction 1 63 - -
Aev03g3420 511 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 406 510 IPR009001 -
Aev03g3420 511 Gene3D Translation factors 403 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g3420 Aev-Chr3 31677910 31685931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g3420 85 511 Eukaryotic Initiation Factors Gene Family AT5G60390 37.674 3.03e-95 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g3420 K03267 - gmx:100793653 841.647