Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g3402 ATGCGTGTTGCTACAGAGACAACAACAGAGCACATCAAATGGAGAAGACAGAGGAACCAATTCAGGCACCACCACCACCCTAACATTTCAGAAGAAGCAGATCCAATCCCAAACCCACAAATCCCTTCAATAATCCAATCCACACGCTGCAAGTCCACCATTTCTTCTCTCCTCCTCTCCACTTTCTCCAACAACAACACCAATGATGCCACCGCCAATGGGACTTCCCAGGGCAGAAAAAAGAGCAATTTTTCTGCTGCAGCAACCTTCAGGGGGCTAGGCTGCACCGCCGGAGCGTCGCAGCAGGTGTCGGTGCCCGCGGTGATCCGAACCTCGGCTGATTGGCAGGGGAAGACGGCCAGAAAGAAGAAGCACAAGAGGAGCACCAAGAACAGCGGTAACAGTGTGAGTAGCAAGGCCTGTAATGGCGGTGGCGGAGTGGTTGTTGATGGTCCCAATCCTGTTGGTACTTGTGTGGATTTTCAAGATGTTTGGTGTGGCCCCGGAATCGGGTTCTCTGCTGATGCTGCTGCCTCTGTTGATTGTGTTGTGGCAAGGAGGAATGCATCTTCAAGAGGCAAAATTGATGTGGACAAGGTTAATCACAGAGAGCGTTCATCTTACTTGGGAAGGCGCAGTATCAACCCAGAACCCATCTCTTTTGTGGACACTGATTCTGACATTTTCACGCCACGCTCTGAGTCTTTTGGACCTGCTGCCACATACTATCGCCATATTAGAGATCCTTCCTCCGATGGTTTTGCTGAGATTATGATGCTTCAAGGAGGTCTAATAATGGGAGGACGAGTAAATTCACATGACCAATTCAGAGACTGGAGGCTTGATGTTGATAACATGTCATATGAGCAATTGCTTGAGCTTAGTGAGAGAATCGGTTATGTCAACACTGGACTCAAAGAAGATGAGATGGGACACAACATAAGGAAGACTAAACTTCAGTTTGCAGATGGTGATTTATCAAAGCATCAAGCAGACAAAAAGTGCAGCATTTGTCAGGAGGAGTATGAAGCAGGTGATGAAATAGGGAGGTTGAACTGTGAACACAGTTATCACTTTCATTGTATAAAACAATGGGTTGCTCACAAGAATTTCTGCCCTGTCTGCAAGCAACAAGTTGTGGCTCGCAACTGA 1152 0.4757 MRVATETTTEHIKWRRQRNQFRHHHHPNISEEADPIPNPQIPSIIQSTRCKSTISSLLLSTFSNNNTNDATANGTSQGRKKSNFSAAATFRGLGCTAGASQQVSVPAVIRTSADWQGKTARKKKHKRSTKNSGNSVSSKACNGGGGVVVDGPNPVGTCVDFQDVWCGPGIGFSADAAASVDCVVARRNASSRGKIDVDKVNHRERSSYLGRRSINPEPISFVDTDSDIFTPRSESFGPAATYYRHIRDPSSDGFAEIMMLQGGLIMGGRVNSHDQFRDWRLDVDNMSYEQLLELSERIGYVNTGLKEDEMGHNIRKTKLQFADGDLSKHQADKKCSICQEEYEAGDEIGRLNCEHSYHFHCIKQWVAHKNFCPVCKQQVVARN* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g3402 383 ProSiteProfiles Zinc finger RING-type profile. 335 376 IPR001841 -
Aev03g3402 383 SMART ring_2 335 375 IPR001841 -
Aev03g3402 383 MobiDBLite consensus disorder prediction 114 144 - -
Aev03g3402 383 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 301 381 IPR013083 -
Aev03g3402 383 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 5 382 IPR045191 GO:0061630
Aev03g3402 383 Pfam Ring finger domain 334 376 IPR001841 -
Aev03g3402 383 SUPERFAMILY RING/U-box 334 380 - -
Aev03g3402 383 PANTHER C3HC4-TYPE RING ZINC FINGER PROTEIN 5 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g3402 Aev-Chr3 31586493 31590017 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g3402 10 289 C3H Transcription Factor Family AT1G73760 44.218 6.00e-58 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g3402 - - gmx:100788837 520.776