Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g3401 ATGGGTAAGAAGAAGAAGAGGGTTTCGTCGAAGGTGTGGTGCTACTACTGCGATCGGGAATTCGACGACGAGAAGATATTGGTGCAGCATCAGAAGGCCAAGCACTTCAAGTGCCATGTCTGCCACAAGAAGCTCTCCACCGCCGGCGGCATGGCCATCCACGTCCTCCAGGTCCACAAGGAATCCGTCACCAAGGTGCCCAATGCGAAACCTGGTAGAGAGAGCACGGATATTGAAATATATGGAATGCAAGGGATTCCGCCAGATGTCTTGGCTGCTCATTATGGAGAAGAAGATGATGAAGTTCCATCAAAGGCTGCCAAGGTGGATATACCAACAACCCAGCTTGTAGGTGGAATGGTTCCTCCTCCTTTGGGCCCAGGATATCCTCCCCGACCAACCTTGGGCACAATGCCACCAGTTTATAATCCAGCCGTACCTGTCCCTCCTAATGCATGGGCAGTTCCACCTCGACCTCAGCCTTGGTTTCCTCAACCTCCAACTGTTTCAATTCCTCCTCCTGCCCCATACACACAGCAGCCATTATTTCCTGTGCAGAATGTGAGACCACCATTGCCATCAGCAACTGCTCCTCCTGCACCCCATACTCAGATCACTCCTCCTGGATTGCCTACATCTACACCTTCCATCCCCGTTTCACAACCTTTGTTTCCTGTTGTTGGAAATAACCCTACAATTCCTCAAAGTTCAACATTTTCTGCTGCCCCCTTATCTTCAAGTGTTCCATCAATTACACCAGTTCCTCCTTCAAATGTCTCTGTTGATGCACATTTGGGTGGTAACTCCTCTTTAACAAATGCTTATCAGGCAATAGGTGTTCCAGGTGGGATAGCAAGTAATTCACACTCTTATGCATCTGGTCCAAATACTGGTGGTCCTTCAATTGGACCTCCCCCAGTTATTGCAAACAAAGCACCTGCACCTCAGCCTGCTGCTAATGAAGTCTACTTGGTTTGGGATGATGAGGCGATGTCCATGGAGGAAAGGAGAATGTCTTTACCAAAATATCAGGTGCATGATGAAACTAGCCAGATGAGCTCCATTGATGCAGCCATAGATAAGAGGATACTTGAAAGCAGGCTGGCTGGTCGAATGGCATTTTAG 1125 0.4871 MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKESVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEDDEVPSKAAKVDIPTTQLVGGMVPPPLGPGYPPRPTLGTMPPVYNPAVPVPPNAWAVPPRPQPWFPQPPTVSIPPPAPYTQQPLFPVQNVRPPLPSATAPPAPHTQITPPGLPTSTPSIPVSQPLFPVVGNNPTIPQSSTFSAAPLSSSVPSITPVPPSNVSVDAHLGGNSSLTNAYQAIGVPGGIASNSHSYASGPNTGGPSIGPPPVIANKAPAPQPAANEVYLVWDDEAMSMEERRMSLPKYQVHDETSQMSSIDAAIDKRILESRLAGRMAF* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g3401 374 ProSitePatterns Zinc finger C2H2 type domain signature. 38 59 IPR013087 -
Aev03g3401 374 SMART c2h2final6 12 35 IPR013087 -
Aev03g3401 374 SMART c2h2final6 36 59 IPR013087 -
Aev03g3401 374 PANTHER BUB3-INTERACTING AND GLEBS MOTIF-CONTAINING PROTEIN ZNF207 1 374 - -
Aev03g3401 374 PANTHER ZINC FINGER PROTEIN 207 1 374 - -
Aev03g3401 374 ProSitePatterns Zinc finger C2H2 type domain signature. 14 35 IPR013087 -
Aev03g3401 374 ProSiteProfiles Zinc finger BED-type profile. 7 66 IPR003656 GO:0003677
Aev03g3401 374 Gene3D Classic Zinc Finger 1 66 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g3401 1 354 C2H2 Transcription Factor Family AT1G30970 64.130 1.23e-141 406
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev03g3401 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g3401 - - gmx:100789368 578.556